LOCUS BC071565 5358 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 79, mRNA (cDNA clone
IMAGE:5267450), containing frame-shift errors.
ACCESSION BC071565
VERSION BC071565.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51339292
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5358
/db_xref="H-InvDB:HIT000264394"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5267450"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1795 a 964 c 1217 g 1382 t
ORIGIN
1 gtcgtggccc gcagccccgc ggcggcggaa aggtaaccga cccgccctgg ggtgctgcgt
61 gcgctgcctg ctcccgcctg aggaaaacac tgcccatggc gcaaggccgg gagcgcgacg
121 aaggccccca ctccgccggc ggcgcgtcct tgtccgtgag atgggtgcaa ggattcccta
181 agcagaatgt tcattttgtc aacgacaaca ccatttgcta cccttgtggg aattatgtaa
241 tatttattaa tattgaaacc aagaaaaaga ctgtactgca gtgtagtaat ggaattgtgg
301 gcgtcatggc aactaacatc ccctgtgaag ttgtggcttt ttctgaccgg aagctaaaac
361 ctctcatcta cgtatacagc tttccaggat tgaccagaag gaccaaattg aaaggcaaca
421 ttctcctgga ctacacttta ctttcattca gttactgtgg cacctacctg gctagttact
481 cctctctccc agaatttgaa ctggcccttt ggaactggga atcgagtatc attttgtgta
541 ggaaatcaca gcctggaatg gatgtgaacc aaatgtcttt taaccccatg aactggcgcc
601 agctgtgctt atcaagtcca agtacagtga gcgtgtggac cattgaaaga agtaaccagg
661 agcattgttt cagagcaagg tcggtgaaat tacctctaga agatgggtca ttttttaatg
721 aaacggatgt cgttttcccc cagtcgttgc cgaaagatct catctatggt cccgtgctgc
781 cactgtcagc cattgccggg ctggtaggca aagaggcaga gactttccgg ccgaaagatg
841 atctatatcc tttgcttcac ccgactatgc attgctggac tccaacaagt gacttgtaca
901 ttggctgtga agagggtcat cttttaatga ttaatggaga caccttgcaa gtgactgtac
961 ttaataagat agaagaggaa tcgccattgg acagaagaaa ttttatcagt ccagtaacct
1021 tggtatatca gaaggagggc gtgctggctt ctggaattga tggctttgtg tattctttta
1081 ttattaaaga tagaagttac atgatcgagg attttcttga gattgaaaga cctgtagaac
1141 atatgacatt ttctcccaat tatacagtgt tgctgattca aacagacaag ggatctgttt
1201 atatctacac ttttggtaag gagccaacct taaataaagt cctagatgct tgtgatggga
1261 aatttcaggc aattgacttt atcacacctg gaacccaata cttcatgaca cttacatatt
1321 caggggaaat ttgtgtttgg tggctggagg attgtgcttg tgtaagcaag atttatctga
1381 ataccctagc aacggttctg gcttgctgtc catcctccct ctctgcagcc gtgggcacgg
1441 aggatggctc ggtctacttc atcagcgtat atgataagga atcccctcag gtcgtgcaca
1501 aggcctttct ctcggaatcg tccgtgcagc acgtcgttta tgatcagcaa ggaatatttc
1561 tgttagttgg aacagcagaa ggaaaagtct ttattatcaa tgccaactcc tcaagctcat
1621 ttcagattat tggattcaca gaggtggcca aagacattta cagatatcca cagtgtctct
1681 tttagaaaca gacatagtgg aagtgatggt gctttcctcg cttccagaag cagggagaag
1741 caggttggag atgttcacac tgcctacatt actgccacaa gtttccacaa cctttgctga
1801 tgaaagagga aggctgaaag atgaaatcat tcataagtac ctgtatgagt tggagcacgc
1861 tctgtcctct gcagtcttgg gctttcaaag taaccaaata tatggcttct gtagtcaagt
1921 gccatacatc tgtagctacc ttcttcctga agaagaacat accggtatct acattcttaa
1981 accatacaaa aaagtacaaa gcagacagta tggacctgga ctgctctatc tgtcttcaca
2041 tggattgtgg ctcataacaa tagctaaatg tggaattctg tgtatccgag acgtttatac
2101 tttggaaaca tttgcttggt gtcggagtca ttctcaccag ggtcatggga ttcagtcaat
2161 gagaatttca atggatggac aaaacattct ggtgaatggg agagatgatg gcacccttgt
2221 ctacctaaag tggaagcgat ttggaggaca cctagccagt gaaattctgg actattacca
2281 gaaactatta atttccctga gcagcgccat ggacaaggag aatcattatt taagcacaac
2341 accaaaagtt tccgtagatt tgggatccga ttctgaacac acaaaacaga aggcaagcac
2401 tgacttatca caagatgaat tagttctaac cgatgttaag aaggaaattc cttggataca
2461 acaaaaaagc caagaggcca tcaaaaagga ggttaatctg ttttccaaga aaaggaaaga
2521 gataaaacaa ggaatcaaat cactttccaa aactattctg aatatgatgg aagaaaatga
2581 caaactagaa aatattgcaa aattagacca acaggaattt ggtctggatc ttgaggaact
2641 agaaaggctt catgatgaaa gtcaggaaga agtggcaaag atgataaggg atgtagagat
2701 gcataactta gccaagagct atttggctga acttatcaaa gaagaatgtt ggaattcgat
2761 ggctgtgaaa ggtcgagctc ttaagtgttt tcatatcccc tgtgtggttg aaaacttccc
2821 gatgaaagcg cgcacggttg aagagctgaa agaattggaa agagttttac agcaaaagaa
2881 gattgaagca gagtgtctta aactacggaa ggaaattgta gaggctcagt ctggagttaa
2941 gttgattaaa cagcgtcatg aagaggatga tgaagaagag gaagaggaag acaagacagt
3001 aaaatatagc aatttgccca attacctgct tggtagtctg agtactgatt ttggggtaga
3061 tacctcttta ttgtcaagcc aattggagct tcattccaga gaagagaaaa tcaaccaaat
3121 tatattattg aaagatatca tttacaaggt aaaaactgtt ttcaataatg agtttgacgc
3181 tgcatataaa caaaaagagt ttgaaattgc acgcgtgaag gaaagaaatg ttcgaattcg
3241 agaaattatt ttagatctgg aattggaaga agcagtctgg caaccagaat ttgaagactg
3301 tgagaagcca gagagaacgc ttgttgtgca agatgaggag attacagccc acaaacacat
3361 taagccgtgg cacaaagcca aagaattgat cgtgaatcat gaaaaggagc actggcttct
3421 gatacaggat gccagtacaa gactccgagc tctgatggac atgatgggag gagttctgga
3481 agtcaagaag gaagatattt tgagaatggt gattcctcaa cctgctttca tggcaaaacc
3541 tgatgctgtg tggactgaag aagaaagaaa acaattcaaa gattatgaga aaaaagtaaa
3601 ggagttaaat gaagaaagag ataagtatag aaagtcatta gaagcagaac tgaagaaact
3661 tcaaaactct attcaagaaa gcacacaggc ctttgatgaa catttgaaaa gactttttga
3721 aaggagagtg aaggcagtga tggttaccaa ccaggaggaa ctgaaaataa gtaaccttgc
3781 attttcttta ttgttggatg aagaattaag ctctagagaa aaattcctga acaactacct
3841 tacaaggaaa cagcacgaga aaagccagac ttcagaagct gttcggagat ctagagaaga
3901 cctggatgtg tgcaaggagc actatgacaa cttactggca gaagacaaag ttatggatcg
3961 cagctttaaa aaggaatttt ctgaaattcc tggtcatcaa gtggatatac tctacaaact
4021 ttttaaacgc cgaccaagga tttccaaaca gaaaacgcac tcagaaacaa ccagcgttgt
4081 ccctttcgga gaactaccag gatctggcaa gttgaataag gatgcctttg cccagttaat
4141 gaaagctatg gatgagttgg acaatattag taacatgcca gaaggcttgg accctttggt
4201 ctggaatcat ttctgcatga caagacgagc aaaagtggaa aatgaacaga aagtaaagca
4261 gaaagcagct gacttattgg aaatggcaac tttcctccag aagagagttg aggaggaaga
4321 gaaggtgcaa caggagattg agagagtgtt ccatgaactc atcctattac aggaagagaa
4381 agtgagattc cagttgaatt tgacaatcca aattcttctt aaacaaggac aagtagaact
4441 ggaaaatttc cagctagtac tggagtattc tgatgcaatt ctcatcaaca agaacataat
4501 tgaagacttg aattctgtga ttcggactca aggacaaaag aaagttgcta gcatgatgga
4561 aagtaaagat gtacacaaaa gaatacttca gattgagtgg gaacataaga aaatggagat
4621 ggaaagggaa gatctaaatc agaaggcttg ggatattcag atgctatttt tttcaagaga
4681 tcgtcaaaag tacctaaatg aaccaaacta tgaggctctg attagtattc agattggaat
4741 aatggaacaa accattgctg ttttagataa gatgcacaaa aagaatgtgg aaaactgcaa
4801 gaaactactc aaaaaacttg gaaagttcag caatcaaaaa gatatagcaa attatgccct
4861 aagctgcaat ctacgagaag agttggtagc tgtctcagag agaaaagaca tctgtaatgc
4921 aatggggtct aaactgactt gtgaaaagat tgtcaaagaa cggtatgaaa acatgatgca
4981 acagcagaag ttaacaaata tttcaaaaca acaagctgaa cagatttcaa tactacagac
5041 tgaagttgaa agattaagaa tgaaaacatt tcctgctctt gttcaaatgt aaaaacgctg
5101 gcaggaaaac acaaggccaa atcaatcatt taaaaaatca tttcatttgg gtaaaatgat
5161 ttccttttct ttcttactgg gaaattgaag tagcatgtcc tctgagttgc atgttttaga
5221 taaaaaattg tttaatttta gccttaattg tatacaaatt tttgtcctgc atgaataaat
5281 gtgtaaaata ccatgaattg ctgtttttat tcaagaataa acaagacttg aagtcagaaa
5341 gtaaaaaaaa aaaaaaaa
//