LOCUS BC071168 1784 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens voltage-dependent anion channel 1, mRNA (cDNA clone
MGC:88007 IMAGE:6023095), complete cds.
ACCESSION BC071168
VERSION BC071168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1784)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1784)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507878.
FEATURES Location/Qualifiers
source 1..1784
/db_xref="H-InvDB:HIT000264378"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88007 IMAGE:6023095"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1784
/gene="VDAC1"
/gene_synonym="PORIN"
/gene_synonym="PORIN-31-HL"
/db_xref="GeneID:7416"
/db_xref="HGNC:HGNC:12669"
/db_xref="MIM:604492"
CDS 63..914
/gene="VDAC1"
/gene_synonym="PORIN"
/gene_synonym="PORIN-31-HL"
/codon_start=1
/product="voltage-dependent anion channel 1"
/protein_id="AAH71168.1"
/db_xref="GeneID:7416"
/db_xref="HGNC:HGNC:12669"
/db_xref="MIM:604492"
/translation="MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSS
GSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSS
FSPNTGKKNAKIKTGYKREHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETA
KSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTR
FGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLG
LGLEFQA"
BASE COUNT 503 a 382 c 406 g 493 t
ORIGIN
1 gcctccgcgt cgcagccccc gccgtagccg cctccgagcc cgccgccaca tcctctgaga
61 agatggctgt gccacccacg tatgccgatc ttggcaaatc tgccagggat gtcttcacca
121 agggctatgg atttggctta ataaagcttg atttgaaaac aaaatctgag aatggattgg
181 aatttacaag ctcaggctca gccaacactg agaccaccaa agtgacgggc agtctggaaa
241 ccaagtacag atggactgag tacggcctga cgtttacaga gaaatggaat accgacaata
301 cactaggcac cgagattact gtggaagatc agcttgcacg tggactgaag ctgaccttcg
361 attcatcctt ctcacctaac actgggaaaa aaaatgctaa aatcaagaca gggtacaagc
421 gggagcacat taacctgggc tgcgacatgg atttcgacat tgctgggcct tccatccggg
481 gtgctctggt gctaggttac gagggctggc tggccggcta ccagatgaat tttgagactg
541 caaaatcccg agtgacccag agcaactttg cagttggcta caagactgat gaattccagc
601 ttcacactaa tgtgaatgac gggacagagt ttggcggctc catttaccag aaagtgaaca
661 agaagttgga gaccgctgtc aatcttgcct ggacagcagg aaacagtaac acgcgcttcg
721 gaatagcagc caagtatcag attgaccctg acgcctgctt ctcggctaaa gtgaacaact
781 ccagcctgat aggtttagga tacactcaga ctctaaagcc aggtattaaa ctgacactgt
841 cagctcttct ggatggcaag aacgtcaatg ctggtggcca caagcttggt ctaggactgg
901 aatttcaagc ataaatgaat actgtacaat tgtttaattt taaactattt tgcagcatag
961 ctaccttcag aatttagtgt atcttttaat gttgtatgtc tgggatgcaa gtattgctaa
1021 atatgttagc cctccaggtt aaagttgatt cagctttaag atgttaccct tccagaggta
1081 cagaagaaac ctatttccaa aaaaggtcct ttcagtggta gactcgggga gaacttggtg
1141 gcccctttga gatgccaggt ttctttttta tctagaaatg gctgcaagtg gaagcggata
1201 atatgtaggc actttgtaaa ttcatattga gtaaatgaat gaaattgtga tttcctgaga
1261 atcgaacctt ggttccctaa ccctaattga tgagaggctc gctgcttgat ggtgtgtaca
1321 aactcacctg aatgggactt ttttagacag atcttcatga cctgttccca ccccagttca
1381 tcatcatctc ttttacacca aaaggtctgc agggtgtggt aactgtttct tttgtgccat
1441 tttggggtgg agaaggtgga tgtgatgaag ccaataattc aggacttatt ccttcttgtg
1501 ttgtgttttt tttttgccct tgcaccagag tatgaaatag cttccaggag ctccagctat
1561 aagcttggaa gtgtctgtgt gattgtaatc acatggtgac aacactcaga atctaaattg
1621 gacttctgtt gtattctcac cactcaattt gttttttagc agtttaatgg gtacatttta
1681 gagtcttcca ttttgttgga attagatcct ccccttcaaa tgctgtaatt aacaacactt
1741 aaaaaacttg aataaaatat tgaaacctca aaaaaaaaaa aaaa
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