LOCUS BC070257 1095 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens C-reactive protein, pentraxin-related, mRNA (cDNA
clone IMAGE:4767652), complete cds.
ACCESSION BC070257
VERSION BC070257.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1095)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1095)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835134
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1095
/db_xref="H-InvDB:HIT000264215"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4767652"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1095
/gene="CRP"
/gene_synonym="PTX1"
/db_xref="GeneID:1401"
/db_xref="MIM:123260"
CDS 400..540
/gene="CRP"
/gene_synonym="PTX1"
/codon_start=1
/product="CRP protein"
/protein_id="AAH70257.1"
/db_xref="GeneID:1401"
/db_xref="MIM:123260"
/translation="MWDFVLSPDEINTIYLGGPFSPNVLNWRALKYEVQGEVFTKPQL
WP"
BASE COUNT 298 a 250 c 288 g 259 t
ORIGIN
1 gaaggcaaga gatctaggac ttctagcccc tgaactttca gccgaataca tcttttccaa
61 aggagtgaat tcaggccctt gtatcactgg cagcaagaca atgagattct catattttgg
121 tctaaggata taggatacag ttttacagtg ggtgggtctg aaatattatt cgaggttcct
181 gaagtcacag tagctccagt acacatttgt acaagctggg agtccgcctc agggatcgtg
241 gagttctggg tagatgggaa gcccagggtg aggaagagtc tgaagaaggg atacactgtg
301 ggggcagaag caagcatcat cttagggcag gagcaggatt ccttcggtgg gaactttgaa
361 ggaagccagt ccctggtggg agacattgga aatgtgaaca tgtgggactt tgtgctgtca
421 ccagatgaga ttaacaccat ctatcttggc gggcccttca gtcctaatgt cctgaactgg
481 cgggcactga agtatgaagt gcaaggcgaa gtgttcacca aaccccagct gtggccctga
541 ggcccagctg tgggtcctga agtgctttct taattttatg gctcttctgg gaaactcctc
601 cccttttcca cacgaacctt gtggggctgt gaattctttc ttcatccccg cattcccaat
661 atacccaggc cacaagagtg gacgtgaacc acagggtgtc ctgtcagagg agcccatctc
721 ccatctcccc agctccctat ctggaggata gttggatagt tacgtgttcc tagcaggacc
781 aactacagtc ttcccaagga ttgagttatg gactttggga gtgagacatc ttcttgctgc
841 tggatttcca agctgagagg acgtgaacct gggaccacca gtagccatct tgtttgccac
901 atggagagag actgtgagga cagaagccaa actggaagtg gaggagccaa gggattgacg
961 aacaacagag ccttgaccac gtggagtctc tgaatcagcc ttgtctggaa ccagatctac
1021 acctggactg cccaggtcta taagccaata aagcccctgt ttaccaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaa
//