LOCUS BC070182 1461 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens protein tyrosine phosphatase type IVA, member 2, mRNA
(cDNA clone MGC:88163 IMAGE:4686913), complete cds.
ACCESSION BC070182
VERSION BC070182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1461)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1461)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18104974.
FEATURES Location/Qualifiers
source 1..1461
/db_xref="H-InvDB:HIT000264140"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88163 IMAGE:4686913"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1461
/gene="PTP4A2"
/gene_synonym="HH13"
/gene_synonym="HH7-2"
/gene_synonym="HU-PP-1"
/gene_synonym="OV-1"
/gene_synonym="PRL-2"
/gene_synonym="PRL2"
/gene_synonym="ptp-IV1a"
/gene_synonym="ptp-IV1b"
/gene_synonym="PTPCAAX2"
/db_xref="GeneID:8073"
/db_xref="HGNC:HGNC:9635"
/db_xref="MIM:601584"
CDS 329..832
/gene="PTP4A2"
/gene_synonym="HH13"
/gene_synonym="HH7-2"
/gene_synonym="HU-PP-1"
/gene_synonym="OV-1"
/gene_synonym="PRL-2"
/gene_synonym="PRL2"
/gene_synonym="ptp-IV1a"
/gene_synonym="ptp-IV1b"
/gene_synonym="PTPCAAX2"
/codon_start=1
/product="protein tyrosine phosphatase type IVA, member 2"
/protein_id="AAH70182.1"
/db_xref="GeneID:8073"
/db_xref="HGNC:HGNC:9635"
/db_xref="MIM:601584"
/translation="MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVR
VCDATYDKAPVEKEGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCV
AGLGRAPVLVALALIECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDT
NGHCCVQ"
BASE COUNT 441 a 262 c 306 g 452 t
ORIGIN
1 taacttgtct cactagtgcc taaatgtagt aaaggctgct taagttttgt atgtagttgg
61 attttttgga gtccgaaggt atccatctgc agaaattgag gcccaaattg aatttggatt
121 caagtggatt ctaaatactt tgcttatctt gaagagagaa gcttcataag gaataaacaa
181 gttgaataga gaaaacactg attgataata ggcattttag tggtcttttt aatgttttct
241 gctgtgaaac atttcaagat ttattgattt ttttttttca ctttccccat cacactcaca
301 cgcacgctca cactttttat ttgccataat gaaccgtcca gcccctgtgg agatctccta
361 tgagaacatg cgttttctga taactcacaa ccctaccaat gctactctca acaagttcac
421 agaggaactt aagaagtatg gagtgacgac tttggttcga gtttgtgatg ctacatatga
481 taaagctcca gttgaaaaag aaggaatcca cgttctagat tggccatttg atgatggagc
541 tccaccccct aatcagatag tagatgattg gttaaacctg ttaaaaacca aatttcgtga
601 agagccaggt tgctgtgttg cagtgcattg tgttgcagga ttgggaaggg cacctgtgct
661 ggttgcactt gctttgattg aatgtggaat gaagtacgaa gatgcagttc agtttataag
721 acaaaaaaga aggggagcgt tcaattccaa acagctgctt tatttggaga aataccgacc
781 taagatgcga ttacgcttca gagataccaa tgggcattgc tgtgttcagt agaaggaaat
841 gtaaacgaag gctgacttga ttgtgccatt tagagggaac tcttggtacc tggaaatgtg
901 aatctggaat attacctgtg tcatcaaagt agtgatggat tcagtactcc tcaaccactc
961 tcctaatgat tggaacaaaa gcaaacaaaa aagaaatctc tctataaaat gaataaaatg
1021 tttaagaaaa gagaaagaga aaaggaatta attcagtgaa ggatgatttt gctcctagtt
1081 ttggagtttg aatttctgcc aggattgaat tattttgaaa tctcctgtct ttttaaactt
1141 tttcaaaata ggtctctaag gaaaaccagc agaacattag cctgtgcaaa accatctgtt
1201 tggggagcac actcttccat tatgcttggc acatagatct ccctgtggtg ggattttttt
1261 tttccctttt tttgtggggg agggttggtg gtatattttt cccctctttt ttccttcctc
1321 tcctacatct cccttttccc ccgatccaag ttgtagatgg aatagaagcc cttgttgctg
1381 tagatgtgcg tgcagtctgg cagccttaag cccacctggg cacttttaga caaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa a
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