LOCUS BC070176 1526 bp mRNA linear HUM 01-JUN-2004 DEFINITION Homo sapiens Wolf-Hirschhorn syndrome candidate 1, mRNA (cDNA clone IMAGE:6699237), partial cds. ACCESSION BC070176 VERSION BC070176.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1526) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1526) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: NCI cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913360. FEATURES Location/Qualifiers source 1..1526 /db_xref="H-InvDB:HIT000264134" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6699237" /tissue_type="Pooled, 40 cell lines" /clone_lib="NIH_MGC_127" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene <1..1526 /gene="WHSC1" /gene_synonym="KIAA1090" /gene_synonym="MMSET" /gene_synonym="NSD2" /gene_synonym="REIIBP" /gene_synonym="TRX5" /db_xref="GeneID:7468" /db_xref="MIM:602952" CDS <1..460 /gene="WHSC1" /gene_synonym="KIAA1090" /gene_synonym="MMSET" /gene_synonym="NSD2" /gene_synonym="REIIBP" /gene_synonym="TRX5" /codon_start=2 /product="WHSC1 protein" /protein_id="AAH70176.1" /db_xref="GeneID:7468" /db_xref="MIM:602952" /translation="EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA EAEDTPRKRLRTDKHSLRKRDTITDKTARTSSYKAMEAASSLKSQAATKNLSDACKPL KKRNRASTAASSALGFSKSSSPSASLTENELLWEPTPVKLDLNPAALYCT" BASE COUNT 482 a 319 c 321 g 404 t ORIGIN 1 tgagaagcag agagcacgct acaacaccaa gtttgccctg gtggcccctg tccaggctga 61 agaagactct ggtaatgtaa atgggaaaaa aagaaaccac acaaagagga tacaggaccc 121 tacagaagat gctgaagctg aggacacacc caggaaaaga ctcaggacgg acaagcacag 181 tcttcggaag agagacacaa tcactgacaa aacggccaga acaagctctt acaaggccat 241 ggaggcagcc tcctcgctca agagccaggc agcaacgaaa aatctgtctg atgcatgtaa 301 accactgaag aagcgaaatc gggcttccac ggcagcatct tcagctcttg ggtttagcaa 361 aagttcatct ccttctgcat ccttaactga gaatgagctt ttgtgggagc ccacaccagt 421 caagttggat ttgaacccag ctgctctgta ctgcacttag aatgatgtaa tattccagga 481 tgctgctgca ggtggcgtat catcgtacac actcagtgac atttctatca caatcatttt 541 atggaagatg tgtgataatc tgtttttact ggtattaata aacacataca atgaagaaaa 601 cagataacaa attttaagac caaggtaaga taactaatca aggccattta atccgtcaca 661 ttcatctcat aatagaaaca cgttcatatt ccagtggtca atgtagattt caagttgaaa 721 ggcagtccct ttagttgggg gctgtccaga gctgcagcag ggctttgcac ggaaggggtg 781 gccctgttag agttgcttct cctctagttt gtaacttact ggacttttgt ggaaaatatc 841 agcgtcgcta ccctcagaaa caaactaaca gcacacgtta ggaggagtcc tcatcagctg 901 ttctcattgc cagtgagata tattcagtat tgtagatact acactaattt ccaacataag 961 aggcaggaag agttttgatt ctatcctttt ttactaaaca gttttattat gacactagat 1021 acagtaaatt tttagaaaaa aataccattt acagtattat tgtgaaccat ttaacccttt 1081 tgatccaagg ccccggacca aggggatact gtaatcaggt tatgtacacc aacctctgca 1141 tcagttgctt ctatagagca tcagccctca tgtttcattg tcttaatgtc ggggagcagc 1201 ctggtgtcct gccccaggtg tccgcatttt tgcatggtaa ggaaaaggct tacttgccct 1261 tcagctcata aaagcagaag gtgtgctatt cacagtacca tgcgagtagc ccacagttaa 1321 ttcccggcag attctttggc tgtgttttat ctttaatgaa cgtttctgac taatattttg 1381 ttgtaaacca ttaagtaatg taacgcatgt aagatgctta gggtgcctgg ccaggactcc 1441 gtggtttcct gttgtgacag taataatggt tataataata aaaatgataa aattccaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaa //