LOCUS       BC070176                1526 bp    mRNA    linear   HUM 01-JUN-2004
DEFINITION  Homo sapiens Wolf-Hirschhorn syndrome candidate 1, mRNA (cDNA clone
            IMAGE:6699237), partial cds.
ACCESSION   BC070176
VERSION     BC070176.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAY-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: NCI
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 57 Row: m Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 19913360.
FEATURES             Location/Qualifiers
     source          1..1526
                     /db_xref="H-InvDB:HIT000264134"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6699237"
                     /tissue_type="Pooled, 40 cell lines"
                     /clone_lib="NIH_MGC_127"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            <1..1526
                     /gene="WHSC1"
                     /gene_synonym="KIAA1090"
                     /gene_synonym="MMSET"
                     /gene_synonym="NSD2"
                     /gene_synonym="REIIBP"
                     /gene_synonym="TRX5"
                     /db_xref="GeneID:7468"
                     /db_xref="MIM:602952"
     CDS             <1..460
                     /gene="WHSC1"
                     /gene_synonym="KIAA1090"
                     /gene_synonym="MMSET"
                     /gene_synonym="NSD2"
                     /gene_synonym="REIIBP"
                     /gene_synonym="TRX5"
                     /codon_start=2
                     /product="WHSC1 protein"
                     /protein_id="AAH70176.1"
                     /db_xref="GeneID:7468"
                     /db_xref="MIM:602952"
                     /translation="EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA
                     EAEDTPRKRLRTDKHSLRKRDTITDKTARTSSYKAMEAASSLKSQAATKNLSDACKPL
                     KKRNRASTAASSALGFSKSSSPSASLTENELLWEPTPVKLDLNPAALYCT"
BASE COUNT          482 a          319 c          321 g          404 t
ORIGIN      
        1 tgagaagcag agagcacgct acaacaccaa gtttgccctg gtggcccctg tccaggctga
       61 agaagactct ggtaatgtaa atgggaaaaa aagaaaccac acaaagagga tacaggaccc
      121 tacagaagat gctgaagctg aggacacacc caggaaaaga ctcaggacgg acaagcacag
      181 tcttcggaag agagacacaa tcactgacaa aacggccaga acaagctctt acaaggccat
      241 ggaggcagcc tcctcgctca agagccaggc agcaacgaaa aatctgtctg atgcatgtaa
      301 accactgaag aagcgaaatc gggcttccac ggcagcatct tcagctcttg ggtttagcaa
      361 aagttcatct ccttctgcat ccttaactga gaatgagctt ttgtgggagc ccacaccagt
      421 caagttggat ttgaacccag ctgctctgta ctgcacttag aatgatgtaa tattccagga
      481 tgctgctgca ggtggcgtat catcgtacac actcagtgac atttctatca caatcatttt
      541 atggaagatg tgtgataatc tgtttttact ggtattaata aacacataca atgaagaaaa
      601 cagataacaa attttaagac caaggtaaga taactaatca aggccattta atccgtcaca
      661 ttcatctcat aatagaaaca cgttcatatt ccagtggtca atgtagattt caagttgaaa
      721 ggcagtccct ttagttgggg gctgtccaga gctgcagcag ggctttgcac ggaaggggtg
      781 gccctgttag agttgcttct cctctagttt gtaacttact ggacttttgt ggaaaatatc
      841 agcgtcgcta ccctcagaaa caaactaaca gcacacgtta ggaggagtcc tcatcagctg
      901 ttctcattgc cagtgagata tattcagtat tgtagatact acactaattt ccaacataag
      961 aggcaggaag agttttgatt ctatcctttt ttactaaaca gttttattat gacactagat
     1021 acagtaaatt tttagaaaaa aataccattt acagtattat tgtgaaccat ttaacccttt
     1081 tgatccaagg ccccggacca aggggatact gtaatcaggt tatgtacacc aacctctgca
     1141 tcagttgctt ctatagagca tcagccctca tgtttcattg tcttaatgtc ggggagcagc
     1201 ctggtgtcct gccccaggtg tccgcatttt tgcatggtaa ggaaaaggct tacttgccct
     1261 tcagctcata aaagcagaag gtgtgctatt cacagtacca tgcgagtagc ccacagttaa
     1321 ttcccggcag attctttggc tgtgttttat ctttaatgaa cgtttctgac taatattttg
     1381 ttgtaaacca ttaagtaatg taacgcatgt aagatgctta gggtgcctgg ccaggactcc
     1441 gtggtttcct gttgtgacag taataatggt tataataata aaaatgataa aattccaaaa
     1501 aaaaaaaaaa aaaaaaaaaa aaaaaa
//