LOCUS BC070172 978 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens solute carrier organic anion transporter family,
member 1B1, mRNA (cDNA clone IMAGE:4723019), partial cds.
ACCESSION BC070172
VERSION BC070172.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 978)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 978)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923779.
FEATURES Location/Qualifiers
source 1..978
/db_xref="H-InvDB:HIT000264130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4723019"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>978
/gene="SLCO1B1"
/gene_synonym="LST-1"
/gene_synonym="OATP-C"
/gene_synonym="OATP1B1"
/gene_synonym="OATP2"
/gene_synonym="SLC21A6"
/db_xref="GeneID:10599"
/db_xref="MIM:604843"
CDS 103..>978
/gene="SLCO1B1"
/gene_synonym="LST-1"
/gene_synonym="OATP-C"
/gene_synonym="OATP1B1"
/gene_synonym="OATP2"
/gene_synonym="SLC21A6"
/codon_start=1
/product="SLCO1B1 protein"
/protein_id="AAH70172.1"
/db_xref="GeneID:10599"
/db_xref="MIM:604843"
/translation="MDQNQHLNKTAEAQPSENKKTRYCNGLKMFLAALSLSFIAKTLG
AIIMKSSIIHIERRFEISSSLVGFIDGSFEIGNLLVIVFVSYFGSKLHRPKLIGIGCF
IMGIGGVLTALPHFFMGYYRYSKETNINSSENSTSTLSTCLINQILSLNRASPEIVGK
GCLKESGSYMWIYVFMGNMLRGIGETPIVPLGLSYIDDFAKEGHSSLYLGILNAIAMI
GPIIGFTLGSLFSKMYVDIGYVDLSTIRITPTDSRWVGAWWLNFLVSGLFSIISSIPF
FFLPQTQKKKKKKKKK"
BASE COUNT 306 a 159 c 188 g 325 t
ORIGIN
1 agggtggact tgttgcagtt gctgtaggat tctaaatcca ggtgattgtt tcaaactgag
61 catcaacaac aaaaacattt gtatgatatc tatatttcaa tcatggacca aaatcaacat
121 ttgaataaaa cagcagaggc acaaccttca gagaataaga aaacaagata ctgcaatgga
181 ttgaagatgt tcttggcagc tctgtcactc agctttattg ctaagacact aggtgcaatt
241 attatgaaaa gttccatcat tcatatagaa cggagatttg agatatcctc ttctcttgtt
301 ggttttattg acggaagctt tgaaattgga aatttgcttg tgattgtatt tgtgagttac
361 tttggatcca aactacatag accaaagtta attggaatcg gttgtttcat tatgggaatt
421 ggaggtgttt tgactgcttt gccacatttc ttcatgggat attacaggta ttctaaagaa
481 actaatatca attcatcaga aaattcaaca tcgaccttat ccacttgttt aattaatcaa
541 attttatcac tcaatagagc atcacctgag atagtgggaa aaggttgttt aaaggaatct
601 gggtcataca tgtggatata tgtgttcatg ggtaatatgc ttcgtggaat aggggagact
661 cccatagtac cactggggct ttcttacatt gatgatttcg ctaaagaagg acattcttct
721 ttgtatttag gtatattgaa tgcaatagca atgattggtc caatcattgg ctttaccctg
781 ggatctctgt tttctaaaat gtacgtggat attggatatg tagatctaag cactatcagg
841 ataactccta ctgattctcg atgggttgga gcttggtggc ttaatttcct tgtgtctgga
901 ctattctcca ttatttcttc cataccattc tttttcttgc cccaaactca aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaa
//