LOCUS BC070162 914 bp mRNA linear HUM 08-DEC-2006 DEFINITION Homo sapiens cytotoxic T-lymphocyte-associated protein 4, mRNA (cDNA clone MGC:88142 IMAGE:30417685), complete cds. ACCESSION BC070162 VERSION BC070162.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 914) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 914) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: p Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361211. FEATURES Location/Qualifiers source 1..914 /db_xref="H-InvDB:HIT000264120" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88142 IMAGE:30417685" /tissue_type="Blood, peripheral blood mononuclear cells (PBMC) cytoplasmic poly A RNA is pooled sample from 3 and 6 hr after stimulation with PMA and Ionomycin. These reagents are used to activate T- cells that results in lymphokine and cytokine production." /clone_lib="NIH_MGC_191" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..914 /gene="CTLA4" /gene_synonym="CD152" /gene_synonym="CELIAC3" /gene_synonym="CTLA-4" /gene_synonym="GSE" /gene_synonym="IDDM12" /db_xref="GeneID:1493" /db_xref="HGNC:HGNC:2505" /db_xref="MIM:123890" CDS 157..828 /gene="CTLA4" /gene_synonym="CD152" /gene_synonym="CELIAC3" /gene_synonym="CTLA-4" /gene_synonym="GSE" /gene_synonym="IDDM12" /codon_start=1 /product="cytotoxic T-lymphocyte-associated protein 4" /protein_id="AAH70162.1" /db_xref="GeneID:1493" /db_xref="HGNC:HGNC:2505" /db_xref="MIM:123890" /translation="MACLGFQRHKAQLNLAARTWPCTLLFFLLFIPVFCKAMHVAQPA VVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSI CTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDPEPCPDS DFLLWILAAVSSGLFFYSFLLTAVSLSKMLKKRSPLTTGVYVKMPPTEPECEKQFQPY FIPIN" BASE COUNT 250 a 228 c 203 g 233 t ORIGIN 1 ccttctgtgt gtgcacatgt gtaatacata tctgggatca aagctatcta tataaagtcc 61 ttgattctgt gtgggttcaa acacatttca aagcttcagg atcctgaaag gttttgctct 121 acttcctgaa gacctgaaca ccgctcccat aaagccatgg cttgccttgg atttcagcgg 181 cacaaggctc agctgaacct ggctgccagg acctggccct gcactctcct gttttttctt 241 ctcttcatcc ctgtcttctg caaagcaatg cacgtggccc agcctgctgt ggtactggcc 301 agcagccgag gcatcgccag ctttgtgtgt gagtatgcat ctccaggcaa agccactgag 361 gtccgggtga cagtgcttcg gcaggctgac agccaggtga ctgaagtctg tgcggcaacc 421 tacatgatgg ggaatgagtt gaccttccta gatgattcca tctgcacggg cacctccagt 481 ggaaatcaag tgaacctcac tatccaagga ctgagggcca tggacacggg actctacatc 541 tgcaaggtgg agctcatgta cccaccgcca tactacctgg gcataggcaa cggaacccag 601 atttatgtaa ttgatccaga accgtgccca gattctgact tcctcctctg gatccttgca 661 gcagttagtt cggggttgtt tttttatagc tttctcctca cagctgtttc tttgagcaaa 721 atgctaaaga aaagaagccc tcttacaaca ggggtctatg tgaaaatgcc cccaacagag 781 ccagaatgtg aaaagcaatt tcagccttat tttattccca tcaattgaga aaccattatg 841 aagaagagag tccatatttc aatttccaag agctgaggca attcaaaaaa aaaaaaaaaa 901 aaaaaaaaaa aaaa //