LOCUS BC070140 1649 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 6,
mRNA (cDNA clone MGC:88120 IMAGE:4672885), complete cds.
ACCESSION BC070140
VERSION BC070140.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059759.
FEATURES Location/Qualifiers
source 1..1649
/db_xref="H-InvDB:HIT000264098"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88120 IMAGE:4672885"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1649
/gene="ARL6IP6"
/gene_synonym="MGC33864"
/gene_synonym="PFAAP1"
/db_xref="GeneID:151188"
/db_xref="HGNC:HGNC:24048"
CDS 4..684
/gene="ARL6IP6"
/gene_synonym="MGC33864"
/gene_synonym="PFAAP1"
/codon_start=1
/product="ADP-ribosylation-like factor 6 interacting
protein 6"
/protein_id="AAH70140.1"
/db_xref="GeneID:151188"
/db_xref="HGNC:HGNC:24048"
/translation="MSFAESGWRSALRRRGPGTPGPVARPSYSSFTQGDSWGEGEVDE
EEGCDQVARDLRAEFSAGAWSEPRKRSVLPPDGNGSPVLPDKRNGIFPAAAGSRAQPR
RWPVQVLSILCSLLFAILLAFLLAIAYLIVKELHAENLKNEDDVDTGLLGFWTLLIIS
LTAGFSCCSFSWTVTYFDSFEPGMFPPTPLSPARFKKLTGHSFHMGYSMAILNGIVAA
LTVAWCLM"
BASE COUNT 463 a 313 c 325 g 548 t
ORIGIN
1 gccatgtcgt ttgctgagag cgggtggcgg tcggctctgc ggcgccgcgg tcccggcacc
61 ccgggccctg tggctcggcc atcgtattcc tcctttactc agggggacag ctggggtgaa
121 ggcgaagtcg acgaggagga gggatgcgac caagtggctc gcgacctgcg ggcggagttc
181 tcggctgggg cgtggtcaga gcccagaaag cgctcggtgc tcccgccgga cgggaacggg
241 tcgcccgttc tgcccgataa gcgcaatggt atctttcccg cggccgcggg cagcagagcc
301 cagcctcggc ggtggccggt ccaggtcctc tctattctct gctcgctgct cttcgccatt
361 cttctcgcct tcctcctcgc catcgcctac ttgatcgtta aagagttgca tgctgagaat
421 ttgaaaaatg aagatgatgt agacactgga ctattaggat tctggactct acttataata
481 tccctaactg ctggattctc ctgttgcagc ttttcttgga cagtgactta ctttgattct
541 tttgaaccag gaatgtttcc tcctactcct ctttcacctg ccaggttcaa gaaactgact
601 ggacattctt tccacatggg ctatagcatg gcgattttga atggcatcgt agctgctctt
661 actgtagcat ggtgcctcat gtaaacccac actggagcga tattgttggc aaaacttaat
721 catgattgtt ttgtaataac aagaaggagc atcactgtct actcagaaga ctgagaaacc
781 tgctgttcat tatgtagttc agatatttat cacaatcatc ctcattatgg aagacctttt
841 aaagcattgt tttagaatgt ctgagtatta agatacagat taattgggaa tatctgagta
901 ttaagtactt tcttcagagt ataagatgtt tacctcatct ttttactttt gtgtgtgtag
961 ttctttcaag ttgtaggaaa cattttaatg gaatttaaac tcaaaaactt gaatacagga
1021 caatgcttgc cttttcatgt atgtactaca ttttttgcta agaaatactg atatttctgt
1081 ttagttgagc tagaaatact tcttatttat acatttagga aagcaaataa tgcctactac
1141 tccgactttt atagaagcta cttttaaatc agaatattta atttttgata ttcatataat
1201 taatagaagt tgcatttata ttttttatgg ggcatagttc cttatgtgtt tttttaatgt
1261 attttcatac tacatactga atttgtatgt ttttaaaatt gttacatcta gacaactgta
1321 aacattattt ttttagctag tgcaaaccta gtacctgcca tttttactaa tttttgtctt
1381 taaaaaaagc aaaaaagcac attgacctaa gttgaaaatt aagtaagttt atttttaaca
1441 aaaaatgcct gaaaaaagct aaattattta agtcattaag atattgagaa aaaatttgaa
1501 atttttacta tttctgtttc cacaattcca aatatttatc ttggtgtata tattgttact
1561 ttaacagaac ttgcattatt ttgtttttaa taaatataaa catgaaattt ttgtatgtga
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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