LOCUS BC070137 1119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
6, mRNA (cDNA clone MGC:88117 IMAGE:6458246), complete cds.
ACCESSION BC070137
VERSION BC070137.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110943.
FEATURES Location/Qualifiers
source 1..1119
/db_xref="H-InvDB:HIT000264095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88117 IMAGE:6458246"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1119
/gene="PSMA6"
/gene_synonym="IOTA"
/gene_synonym="MGC22756"
/gene_synonym="MGC2333"
/gene_synonym="MGC23846"
/gene_synonym="p27K"
/gene_synonym="PROS27"
/db_xref="GeneID:5687"
/db_xref="HGNC:HGNC:9535"
/db_xref="MIM:602855"
CDS 83..823
/gene="PSMA6"
/gene_synonym="IOTA"
/gene_synonym="MGC22756"
/gene_synonym="MGC2333"
/gene_synonym="MGC23846"
/gene_synonym="p27K"
/gene_synonym="PROS27"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 6"
/protein_id="AAH70137.1"
/db_xref="GeneID:5687"
/db_xref="HGNC:HGNC:9535"
/db_xref="MIM:602855"
/translation="MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRG
KDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWK
YKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYY
CGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVG
VVTVENPKFRILTEAEIDAHLVALAERD"
BASE COUNT 425 a 197 c 236 g 261 t
ORIGIN
1 gcaacttccg ggaggtgctt gtgtgcctgg tgcgggagct acggggccca gggattgtgt
61 ttaaagtagt gcttctacca acatgtcccg tggttccagc gccggttttg accgccacat
121 taccattttt tcacccgagg gtcggctcta ccaagtagaa tatgctttta aggctattaa
181 ccagggtggc cttacatcag tagctgtcag agggaaagac tgtgcagtaa ttgtcacaca
241 gaagaaagta cctgacaaat tattggattc cagcacagtg actcacttat tcaagataac
301 tgaaaacatt ggttgtgtga tgaccggaat gacagctgac agcagatccc aggtacagag
361 ggcacgctat gaggcagcta actggaaata caagtatggc tatgagattc ctgtggacat
421 gctgtgtaaa agaattgccg atatttctca ggtctacaca cagaatgctg aaatgaggcc
481 tcttggttgt tgtatgattt taattggtat agatgaagag caaggccctc aggtatataa
541 gtgtgatcct gcaggttact actgtgggtt taaagccact gcagcgggag ttaaacaaac
601 tgagtcaacc agcttccttg aaaaaaaagt gaagaagaaa tttgattgga catttgaaca
661 gacagtggaa actgcaatta catgcctgtc tactgttcta tcaattgatt tcaaaccttc
721 agaaatagaa gttggagtag tgacagttga aaatcctaaa ttcaggattc ttacagaagc
781 agagattgat gctcaccttg ttgctctagc agagagagac taaacattgt cgttagttta
841 ccagatccgt gatgccactt acctgtgtgt ttggtaacaa caaaccaaca tcatggaggt
901 ccctggattg aaaaaggagc ctctcccact cctcctacca ccgaagtggt taggactcta
961 tataaataaa aacaaggctt ttggaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//