LOCUS BC070135 1453 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens transmembrane protein 116, mRNA (cDNA clone MGC:88115
IMAGE:3839474), complete cds.
ACCESSION BC070135
VERSION BC070135.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1453)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1453)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308397.
FEATURES Location/Qualifiers
source 1..1453
/db_xref="H-InvDB:HIT000264093"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88115 IMAGE:3839474"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1453
/gene="TMEM116"
/gene_synonym="FLJ90167"
/db_xref="GeneID:89894"
/db_xref="HGNC:HGNC:25084"
CDS 370..1107
/gene="TMEM116"
/gene_synonym="FLJ90167"
/codon_start=1
/product="TMEM116 protein"
/protein_id="AAH70135.1"
/db_xref="GeneID:89894"
/db_xref="HGNC:HGNC:25084"
/translation="MKHTQSGQSTSPLVIDFTCRVCQMAFVFSSLIPLLLMTPVFCLG
NTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLT
IMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIK
LTKPQDTKLRMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLC
SQKRFYSRGLNSLESTLTFPASTSTIF"
BASE COUNT 393 a 342 c 293 g 425 t
ORIGIN
1 gcatggggac gctatagcaa ttcgtttgct gtccttcctc tccttcgaag atgacaaggc
61 ctaccatcgt ttcttcctgc ctttgggccg tcaggcagtt ggttgggacc cgctccaacc
121 ctcggttctt cctgcaatac agtggataca atttgtcatg gctactctga gataagacca
181 cttttttatc tgagcttctg tgacctgctc ctgggacttt gctggctcac ggagacactt
241 ctctatggag cttcagtagc aaataaggac atcatctgct ataacctaca agcagttgga
301 cagatattct acatttcctc atttctctac accgtcaatt acatctggta tttgtacaca
361 gagctgagga tgaaacacac ccagagtgga cagagcacat ctccactggt gatagatttt
421 acttgtcgag tttgtcaaat ggcctttgtt ttctcaagcc tgatacctct gctattgatg
481 acacctgtat tctgtctggg aaatactagt gaatgtttcc aaaacttcag tcagagccac
541 aagtgtatct tgatgcactc accaccatca gccatggctg aacttccacc ttctgccaac
601 acatctgtct gtagcacact ttatttttat ggtatcgcca ttttcctggg cagctttgta
661 ctcagcctcc ttaccattat ggtcttactt atccgagccc agacattgta taagaagttt
721 gtgaagtcaa ctggctttct ggggagtgaa cagtgggcag tgattcacat tgtggaccaa
781 cgggtgcgct tctacccagt ggccttcttt tgctgctggg gcccagctgt cattctaatg
841 atcataaagc tgactaagcc acaggacacc aagcttcgca tggcccttta tgttctccag
901 gctctaacgg caacatctca gggtctactc aactgtggag tatatggctg gacgcagcac
961 aaattccacc aactaaagca ggaggctcgg cgtgatgcag atacccagac accattatta
1021 tgctcacaga agagattcta tagcaggggc ttaaattcac tggaatccac cctgactttt
1081 cctgccagta cttctaccat tttttgaaac tacaatactg gaacatccag gaactggagt
1141 tattctacgc taatggattg gaaagaatgt tgggaaagga catcttaaat cttttctaac
1201 tatgccctaa actgcagaac tcaaaggaaa tatagtgcca ttgttagtag tcattctaga
1261 tgaattggga gtatctctcc agttattccc agattcacta gtgatcctta aagtctctat
1321 tcagggagag gaagacactt tccatctcag agatagactc gtgttacctt gatggatatt
1381 ggatttgtct aagtctcttc tagaaaaaat aaattctaga ttattacaaa aaaaaaaaaa
1441 aaaaaaaaaa aaa
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