LOCUS       BC070133                1927 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens nucleoporin 50kDa, mRNA (cDNA clone MGC:88113
            IMAGE:6463796), complete cds.
ACCESSION   BC070133
VERSION     BC070133.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1927)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAY-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: NCI
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 57 Row: j Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24497450.
FEATURES             Location/Qualifiers
     source          1..1927
                     /db_xref="H-InvDB:HIT000264091"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:88113 IMAGE:6463796"
                     /tissue_type="Pooled, 40 cell lines"
                     /clone_lib="NIH_MGC_142"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1927
                     /gene="NUP50"
                     /gene_synonym="MGC39961"
                     /gene_synonym="NPAP60"
                     /db_xref="GeneID:10762"
                     /db_xref="HGNC:HGNC:8065"
                     /db_xref="MIM:604646"
     CDS             323..1729
                     /gene="NUP50"
                     /gene_synonym="MGC39961"
                     /gene_synonym="NPAP60"
                     /codon_start=1
                     /product="nucleoporin 50kDa"
                     /protein_id="AAH70133.1"
                     /db_xref="GeneID:10762"
                     /db_xref="HGNC:HGNC:8065"
                     /db_xref="MIM:604646"
                     /translation="MAKRNAEKELTDRNWDQEDEAEEVGTFSMASEEVLKNRAIKKAK
                     RRNVGFESDTGGAFKGFKGLVVPSGGGRFSGFGSGAGGKPLEGLSNGNNITSAPPFAS
                     AKAAADPKVAFGSLAANGPTTLVDKVSNPKTNGDSQQPSSSGLASSKACVGNAYHKQL
                     AALNCSVRDWIVKHVNTNPLCDLTPIFKDYEKYLANIEQQHGNSGRNSESESNKVAAE
                     TQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGATSASFNFGKK
                     VDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQAEGDSGECK
                     GGDEEENDEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQKTQ
                     LLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNATMPVTMLIRVK
                     TSEDADELHKILLEKKDA"
BASE COUNT          576 a          443 c          470 g          438 t
ORIGIN      
        1 gtttttgggg gtagattcga gttacaaaat ggccgcccgg agcgtgttcg gcgcggttcc
       61 cccagctgtc tctggctgaa ccggcgctct cgcctccctg ccgaacacag cgtgaggagc
      121 ccccccaggg atatggtgtt tgagtctctg ggcttgccga gcactaagtc ctctgagttc
      181 cgcagcgcag caccggaagc ggccgagcgc gctcagcccg gcgacccctg cgggctccag
      241 acccctgcgc cgctgcgccc cgggtttcgc cgcaaccaag acccagcgag tgcagcggcg
      301 gccgccgagg aggttcgaaa acatggccaa aagaaatgcc gagaaggaac tgacagatag
      361 gaattgggat caagaagatg aagctgaaga ggtgggaaca ttctccatgg ccagtgagga
      421 agtcttgaag aatagagcca taaagaaagc aaagcgcaga aatgttggat ttgaatctga
      481 cactggagga gcctttaaag gttttaaagg tttggtggta ccttctggag gaggacgctt
      541 ttctggattt ggtagtggcg ctggagggaa gcctttggaa ggactgtcga atggaaacaa
      601 cataaccagt gcccctccct tcgccagtgc aaaggcagcg gcagatccca aggtagcctt
      661 tggttctctt gctgcaaatg gccctaccac cttggttgat aaagtttcaa atcccaaaac
      721 taatggggac agtcagcagc cctcctcctc tggccttgct tccagtaaag cttgtgtcgg
      781 aaatgcctat cacaagcagt tggccgcctt gaactgctcc gtgcgggatt ggatagtgaa
      841 gcacgtgaat acaaaccccc tctgtgatct gacacctatc tttaaagact atgagaaata
      901 tttagcaaac attgaacagc aacacgggaa cagtggcagg aattctgaaa gtgaatctaa
      961 caaagtggca gctgaaacac agtctccttc cctttttggc tcaacaaaat tacagcaaga
     1021 gtcaacgttt ttgtttcatg gcaacaaaac tgaagataca cctgacaaga agatggaggt
     1081 ggcatctgaa aagaaaacgg acccatcatc actaggagcg acaagtgcct catttaattt
     1141 cggcaagaaa gttgatagct ctgttttggg ctcattaagc tctgtccccc tgactggatt
     1201 ttctttctcc cctggaaact ccagtttatt tggcaaagat actacccaga gtaaaccagt
     1261 ctcttcacca tttcccacta aaccattgga gggccaagca gaaggtgaca gtggtgaatg
     1321 caaaggtgga gatgaagaag agaatgatga gccacccaaa gtagtagtta ccgaagtaaa
     1381 agaagaagat gctttttact ccaaaaagtg taaactgttt tacaagaaag acaatgagtt
     1441 taaagagaaa ggcataggta ctctgcattt aaaacctaca gcaaatcaga agacacagct
     1501 tttggtgcgg gcagacacca atttaggcaa catattgctg aacgttctga ttccacccaa
     1561 tatgccatgt acgcgaacag ggaagaataa cgttcttatc gtctgtgttc caaatccacc
     1621 aattgacgag aagaatgcca ccatgccagt caccatgttg attcgggtaa aaaccagcga
     1681 ggatgcagac gagttgcaca aaattttact ggagaaaaag gatgcctgaa cacgcaaagt
     1741 cggctgcaga attattgcca agttgctgct gcttccaccg ccccttaaag ttagtcagtt
     1801 tttcttctct tctttgacat tctaagaact tatagataac ttaaaacttt tgtgaggaag
     1861 attaatgtgg ccaataaaac ctttaaatgt taagtgccaa aaaaaaaaaa aaaaaaaaaa
     1921 aaaaaaa
//