LOCUS BC070108 4378 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens inositol 1,4,5-triphosphate receptor interacting
protein, mRNA (cDNA clone MGC:87628 IMAGE:4837204), complete cds.
ACCESSION BC070108
VERSION BC070108.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47271452.
FEATURES Location/Qualifiers
source 1..4378
/db_xref="H-InvDB:HIT000264066"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87628 IMAGE:4837204"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4378
/gene="ITPRIP"
/gene_synonym="bA127L20"
/gene_synonym="bA127L20.2"
/gene_synonym="DANGER"
/gene_synonym="RP11-127L20.4"
/db_xref="GeneID:85450"
/db_xref="HGNC:HGNC:29370"
CDS 454..2097
/gene="ITPRIP"
/gene_synonym="bA127L20"
/gene_synonym="bA127L20.2"
/gene_synonym="DANGER"
/gene_synonym="RP11-127L20.4"
/codon_start=1
/product="inositol 1,4,5-triphosphate receptor interacting
protein"
/protein_id="AAH70108.1"
/db_xref="GeneID:85450"
/db_xref="HGNC:HGNC:29370"
/translation="MAMGLFRVCLVVVTAIINHPLLFPRENATVPENEEEIIRKMQAH
QEKLQLEQLRLEEEVARLAAEKEALEQVAEEGRQQNETRVAWDLWSTLCMILFLMIEV
WRQDHQEGPSPECLGGEEDELPGLGGAPLQGLTLPNKATLGHFYERCIRGATADAART
REFLEGFVDDLLEALRSLCNRDTDMEVEDFIGVDSMYENWQVDRPLLCHLFVPFTPPE
PYRFHPELWCSGRSVPLDRQGYGQIKVVRADGDTLSCICGKTKLGEDMLCLLHGRNSM
APPCGDMENLLCATDSLYLDTMQVMKWFQTALTRAWKGIAHKYEFDLAFGQLDSPGSL
KIKFRSGKFMPFNLIPVIQCDDSDLYFVSHLPREPSEGTPASSTDWLLSFAVYERHFL
RTTLKALPEGACHLSCLQIASFLLSKQSRLTGPSGLSSYHLKTALLHLLLLRQAADWK
AGQLDARLHELLCFLEKSLLQKKLHHFFIGNRKVPEAMGLPEAVLRAEPLNLFRPFVL
QRSLYRKTLDSFYEMLKNAPALISEYSLHVPSDQPTPKS"
BASE COUNT 981 a 1268 c 1197 g 932 t
ORIGIN
1 gtgcgctctt caggacagca gaggtcggtt ggaggtctgc attctctgcc gacttgggcc
61 ccaacttccc catcaggtca ctgctccctc ctctgaggtc tggacaaagg acaaggctgt
121 agggacctag actgtcctag acggggagga catctatcct cagtggtctt tccagcagtt
181 tgtttggagc tgctcatcct gatcttttgg ctgactctgg cagagggaaa gtcagatttg
241 aggcctgagc tctaacaggc atccagagag gaaggaaggg cccaccccgt gacatcagtg
301 aaacggaagc accctgcagg tgacatcact gttgctcagg gcaacgcctc caccctaagg
361 cggacgggga ggtgaaaaat cggcctcaag tgtgagacgc atgttgaagg gaagggacat
421 agaaggtgta acgttcacag gaaagctcca accatggcca tggggctctt ccgcgtgtgt
481 ctggtggtgg tgacggccat catcaaccac ccgctgctgt tcccgcggga gaacgccaca
541 gtccccgaga acgaggagga gatcatccgc aagatgcagg cgcaccagga gaagctgcag
601 ctggagcagt tgcgcctgga ggaggaggtg gctcggctgg cggccgaaaa ggaggcactg
661 gagcaggtgg cggaggaggg caggcagcag aacgagacac gcgtggcctg ggacctctgg
721 agcaccctct gcatgatcct cttcctgatg atcgaggtgt ggcggcagga ccaccaggag
781 gggccctcac ctgagtgcct gggcggtgag gaggatgagc tgcctgggct ggggggcgcc
841 cccttgcagg gcctcaccct gcccaacaag gccacgcttg gccactttta tgagcgctgc
901 atccgggggg ccacggccga tgcagcccgt acccgggagt tcctggaagg cttcgtggat
961 gacttgctgg aagccctgag gagcctctgc aaccgggaca ccgacatgga ggtggaggac
1021 ttcattggcg tggacagcat gtacgagaac tggcaggtgg acaggccact gctgtgccac
1081 cttttcgtgc ccttcacacc ccccgagccc taccgcttcc acccagagct ctggtgctcc
1141 ggccgctcag tgcccctgga tcgccagggc tacggccaga tcaaggtggt ccgcgccgat
1201 ggggacacat tgagctgcat ctgcggcaag accaagctcg gggaagacat gctgtgtctc
1261 ctgcacggca ggaacagcat ggcgcctccc tgcggcgaca tggagaacct gctgtgtgcc
1321 acagattccc tgtacctgga cacgatgcag gtcatgaagt ggttccagac ggccctcacc
1381 agagcctgga agggcatcgc ccacaagtac gagttcgacc tggcctttgg ccagctggac
1441 agcccggggt ccctgaagat caagttccgt tcagggaagt tcatgccctt caacctgatt
1501 cctgtgatcc agtgtgatga ctcggacctg tactttgtct cccaccttcc cagggagccc
1561 tctgagggca ccccagcctc cagcacagac tggctcctgt cctttgctgt ctatgagcga
1621 cacttcctca ggacgacact aaaggcactg cccgagggcg cctgccacct cagctgcctg
1681 cagatagcat ccttcctgct ctccaagcag agccgcctga ccggtcccag cgggctcagc
1741 agctaccacc tgaagacggc cctactgcac ctcctactcc tccggcaggc cgccgactgg
1801 aaggcggggc agctggacgc tcgtctgcac gagttgctgt gcttcctgga gaagagcttg
1861 ctccagaaga agctccacca cttcttcatc ggcaaccgca aggtgcctga ggccatggga
1921 ctccctgagg ccgtgctcag ggccgagccc ctcaacctct tccggccctt cgtcctgcag
1981 cgaagccttt accgtaagac actggactcc ttctatgaga tgctcaagaa tgccccagcg
2041 ctcattagcg agtattccct acatgtcccc tcagaccagc ctaccccaaa aagctgacgt
2101 cttttacaga atgtgggatc ctcgagctaa gatgagggca tccctcacgt tcacacccct
2161 ggtggcatct gccagccctg ttctggggac aaggcgggct ttcgtgggag ccgtgctcag
2221 cctgccagga agccaagccc tacagtgcag aggaaacaga atttcaacgg gaagctggtt
2281 tgcttcatac cattgggatc tgctggtaaa gctgttattt gggtttaggg actgatccct
2341 tgcagtttac ttctggatca ccatgaatgg ccaagatggt ggcagaacac gctgtggacc
2401 ctgagttaga gacaatgcaa atgttggatt gggtgtaatt ctttttgaat cccagatcca
2461 gtctgtactt gaatatgagc agaggatcta caagaatgct gacagggaac cgtgttaaga
2521 cccagcaccc ctattcccag gagcttctgg cctgaccatc tgcagccaaa gcactaacag
2581 ggacagatat gggaatgtcc acctttgatc cgcatcctgc acaatagtgg tcccaccatg
2641 gctgccactt ttttatacta tttggagaaa agaccttgta taaattcgag gcccgaatga
2701 ctaacgtctc tgtcacacgg aaatgggtac ttggtggcat agagaaacac aattagccac
2761 tttttcagct acacttctca ctcagctgca ccctacactt ctcactcagg tgcaccccct
2821 tctgctgtcc tttccccaac gtactgggtc ccgagcgtgg tgggtatttg ccacactggg
2881 tgccagctca gcagcccccc acctctcttt attctctcca aagctggtct ttctgactat
2941 cattgtggta gggggaggac agatgctaaa ggtggaagct gacctggaga aagagacaca
3001 cggggtgact gtggcaaagg acagctggaa aagaaactct atcacttctt cattggcaac
3061 cacaaggcac ctgaggccat ggcactccca gaggctgtgc gcagagccaa gcctctcaac
3121 ctcttctggc cctgcgtcct gcagcgaagt ctctgctgta agacagtaga ctccttcgat
3181 gaggtgctca aaaatgctac ccggggtggt ggtgtctggc ttgcagtctg gcccagttca
3241 gagaaagttg cagagatcag gggccaagga tgtcatagcc ccaggttgtc ctcagggtcc
3301 caatcctagg gcagggtgtg catggaagca agaactatgg aaacctagct ccagtctgca
3361 ggctctgagc ccctagttcc tcactccagc ggggctccct cactgcacag aacccacccc
3421 ttctgtgtgg gcactgctga ccacacagat gacccagacc caaagagcct ggcagaagct
3481 ctgtggttgg agctgggctc cgtctccagg tctggttcag ggggatcagg aaggctcttt
3541 tccacctgtg gcttcactgg ccctttgaga tttcctatct caccgttact tcagttaccc
3601 ttgcaggggg ccagggagtc aagaatatac cgtgttcctc cagggtttaa gccggccatg
3661 ccttcccgag agcataacca acttgacagg ggtgcccagt taccccacaa actgaaggaa
3721 ggagatcctt cccccatccc caggagtgct ctcaaccagc ctcagaaagc ttgagaagat
3781 ggaccctttg cccaccaggg ttaattcctg gtggggcagc tcggctgtga tcagggcaac
3841 caaacctata ggaagccttc cagtgtgagc tggaattaga ctgaacatgt gcttgggcct
3901 gcctctccct agacgcagtt gcggggcact ccagggaatg aaccagctca agtgtgtccc
3961 taacagcagc ctggagctac ccccaatccc tcacagcctg accctcctca ttccatcaga
4021 tgcatttgta gaatcggggc aaatttcctt atttatttat ggcccatgcc tttcgccctc
4081 ttcatcctga tcccgttttg ctttgaagag accccagtaa ccaaaaaaca gcctccagaa
4141 gccaaaacca tgcctggatc tcccatagct tctcctttgc ttccaggaga aagttcactg
4201 aaaaaaaaat atcttctggc ttcttgtgtg tacagagaca acagaactcg gtggggaaac
4261 gggaatcttt tctgcaccaa agctgcttct aaagcagaaa gcagtggggc tcttggtgtt
4321 tcatgctgcc ttatttatat taaaggaaga attaaatctt gcaaaaaaaa aaaaaaaa
//