LOCUS BC070083 4362 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:4375111, containing frame-shift
errors.
ACCESSION BC070083
VERSION BC070083.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4362)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4362)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630430
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4362
/db_xref="H-InvDB:HIT000264041"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4375111"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1316 a 1008 c 988 g 1050 t
ORIGIN
1 ggggtcggac tcgagcgggg cggggctcgc gccagcgccc ccagctccgt ggcggcttcg
61 cccgcgagtc cggaggcagg cgagcagctc ggtcgccccc accggcccca tggcagcccc
121 cggcgcccca gctgagtacg gctacatccg gaccgtcctg ggccagcaga tcctgggaca
181 actggacagc tccagcctgg cgctgccctc cgaggccaag ctgaagctgg cggggagcag
241 cggccgcggc ggccagacag tcaagagcct gcggatccag gagcaggtgc agcagaccct
301 cgccgggaag ggccgcagct ccgtgggcaa cggaaatctt cgccgaacca gcagtgttcc
361 tgagtatgtc tacaacctac acttggttga aaatgatttt gttggaggcc gttccactgt
421 tcctaaaacc tatgacatgc taaaggctgg cacaactgcc acttatgaag gtcgctgggg
481 aagaggaaca gcacagtaca gctcccagaa gtccgtggaa gaaaggtcct tgaggcatcc
541 tctgaggaga ctggagattt ctcctgacag cagcccggag agggctcact acacgcacag
601 cgattaccag tacggccaga gaagccaggc tgggcacacc ctgcaccacc aagaaagcag
661 gcgggccgcc ctcctagtgc caccgagata tgctcgttcc gagatcgtgg gggtcagccg
721 tgctggcaca acaagcaggc agcgccactt tgacacatac cacagacagt accagcatgg
781 ctctgttagc gacaccgttt ttgacagcat ccctgccaac ccggccctgc tcacgtaccc
841 caggccaggg accagccgca gcatgggcaa cctcttggag aaggagaact acctgacggc
901 agggctcact gtcgggcagg tcaggccgct ggtgcccctg cagcacgtca ctcagaacag
961 ggcttccagg tcctcctggc atcagagctc cttccacagc acccgcacgc tgagggaagc
1021 tgggcccagt gtcgccgtgg attccagcgg gaggagagcg cacttgactg tcggccaggc
1081 ggccgcaggg ggaagtggga atctgctcac tgagagaagc actttcactg actcccagct
1141 ggggaatgca gacatggaga tgactctgga gcgagcagtg agtatgctcg aggcagacca
1201 catgctgcca tccaggattt ctgctgcagc tactttcata cagcacgagt gcttccagaa
1261 atctgaagct cggaagaggg ttaaccagct tcgtggcatc ctcaagcttc tgcagctcct
1321 aaaagttcag aatgaagaca ttcagcgagc tgtgtgtggg gccttgagaa acttagtatt
1381 tgaagacaat gacaacaaat tggaggtggc tgaactaaat ggggtacctc ggctgctcca
1441 ggtgctgaag caaaccagag acttggagac taaaaaacaa ataacaggtt tgctgtggaa
1501 tttgtcatct aatgacaaac tcaagaatct catgataaca gaagcattgc ttacgctgac
1561 ggagaatatc atcatcccct tttctgggtg gcctgaagga gactacccaa aagcaaatgg
1621 tttgctcgat tttgacatat tctacaacgt cactggatgc ctaagaaaca tgagttctgc
1681 tggcgctgat gggagaaaag cgatgagaag atgtgacgga ctcattgact cactggtcca
1741 ttatgtcaga ggaaccattg cagattacca gccagatgac aaggccacgg agaattgtgt
1801 gtgcattctt cataacctct cctaccagct ggaggcagag ctcccagaga aatattccca
1861 gaatatctat attcaaaacc ggaatatcca gactgacaac aacaaaagta ttggatgttt
1921 tggcagtcga agcaggaaag taaaagagca ataccaggac gtgccgatgc cggaggaaaa
1981 gagcaacccc aagggcgtgg agtggctgtg gcattccatt gttataagga tgtatctgtc
2041 cttgatcgcc aaaagtgtcc gcaactacac acaagaagca tccttaggag ctctgcagaa
2101 cctcacggcc ggaagtggac caatgccgac atcagtggct cagacagttg tccagaagga
2161 aagtggcctg cagcacaccc gaaagatgct gcatgttggt gacccaagtg tgaaaaagac
2221 agccatctcg ctactgagga atctgtcccg gaatctttct ctgcagaatg aaattgccaa
2281 agaaactctc cctgatttgg tttccatcat tcctgacaca gtcccgagta ctgaccttct
2341 cattgaaact acagcctctg cctgttacac attgaacaac ataatccaaa acagttacca
2401 gaatgcacgc gaccttctaa acaccggggg catccagaaa attatggcca ttagtgcagg
2461 cgatgcctat gcctccaaca aagcaagtaa agctgcttcc gtccttctgt attctgtggg
2521 cacacacgga actgcatcat gcctacaaga aggctcagtt taagaagaca gattttgtca
2581 acagccggac tgccaaagcc taccactccc ttaaagactg aggaaaatga caaagtattc
2641 tcggctgcaa aaatccccaa aggaaaacac ctatttttct actacccagc acaagaaacc
2701 tcaaaagcat gccttgtttc tatccttctc tatttccgtg gtcccctgaa tccagaaaac
2761 aaatagaaca taattttatg agtcttccag aagacctttg caagtttgcc accagtagat
2821 accggccaca ggctcgacaa atagtggtct ttgttattag ggcttatggt acatggcttc
2881 ctggaatcaa aatgtgaatt catgtggaag ggacattaat ccaataaata aggaaagaag
2941 ctgttgcatt actgggattt taaaagtttg atttacattt atattccttt tctggttccc
3001 atgttttgtc actcatgtgc acattgcttc gccattgggc ctccagtgta ttgttctgca
3061 gtgttgaaac agaatggaaa tgacaagaaa tatctgcagt tatccaggag aaagtataat
3121 ggcaaaatta ttggtttctt tctttacttt gtgcttgttt ttatcccctt gggttgtttt
3181 tctctgattt ttaaataaac ttaagaaatt tagattacag agtatgcatg actgtaagaa
3241 aaagaaattg agaggaagtg atcatagcaa attaaagaag tcttttcctc ccagaactta
3301 aagtaaaata aaaaataaat aaataaataa aatcttttcc acagagaaag gcaactgtga
3361 tgataaaatt taacgttccc ccaaacactg agtcaatgag atttttctca ggagatactt
3421 tacctataac aacgccgtta aatccaaatc tcttctaaac gatggcattc tatgtaatgc
3481 ctttcctgga cttttttggc cactgccctg gactagtgaa agaatggact ctatctttat
3541 ctgcaagagg aactaaggcc ttctatcaga ctgcctggcc agcctggggc actgaaaata
3601 cggctcatgt taatgagtta cattatcagc cagcccagcc ttgcccacca tttaagaaat
3661 atcacagagc cactagatct tatatgatct tcttcaagcc attattttaa ctcaagaaaa
3721 ctctagagaa gaaaagtgaa gaagtcatgt tgaagaagat gtaagaatgt gtcaagacca
3781 tccagaaatg atatgagaaa tactgatatt ttaaatggtt gacatcatcc agcgaaatga
3841 atctacatta aatgttgttt taactgcgct atgattaaaa ccattcatat agagttagtc
3901 tttacaacta ctattctgtt attttttttt ttaatctgac aacatttgtc ctaagtaaga
3961 taagcaaaaa aattcttcaa ctccttttgg caagaaaact gtaacagaaa ataaattttg
4021 aatgtgtact taagtcttta ttatatttga agcaattttt tttcaatttt aaaagctgaa
4081 tgaagacaac ttaggttgct aacctagttc aaaatgaaat tatttagata ccaattttta
4141 aaatactgga gagaatttat atgtcttttt ccagagttct gatgataagc atttggagtg
4201 catttattcc tccagataat aaatgtgtgt tcagaacttt ttgtgttttt taaggcatta
4261 ataaagcctt cgataatatt aaatacaaaa tgaaaataaa aaaaaaaaaa aaaaaaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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