LOCUS BC069725 1956 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase
3B1, mRNA (cDNA clone MGC:97246 IMAGE:7262495), complete cds.
ACCESSION BC069725
VERSION BC069725.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 5 Row: b Column: 9.
FEATURES Location/Qualifiers
source 1..1956
/db_xref="H-InvDB:HIT000263876"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97246 IMAGE:7262495"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_244"
/note="Vector: pPCR-Script Amp SK(+)"
gene 1..1956
/gene="HS3ST3B1"
/gene_synonym="30ST3B1"
/gene_synonym="3OST3B1"
/db_xref="GeneID:9953"
/db_xref="MIM:604058"
CDS 270..1442
/gene="HS3ST3B1"
/gene_synonym="30ST3B1"
/gene_synonym="3OST3B1"
/codon_start=1
/product="heparan sulfate D-glucosaminyl
3-O-sulfotransferase 3B1"
/protein_id="AAH69725.1"
/db_xref="GeneID:9953"
/db_xref="MIM:604058"
/translation="MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWL
YMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALATAPDGTPPRLPFRAPPATPLASGK
EMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVH
PDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMS
KDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIY
AKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGF
PCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDFGWD"
BASE COUNT 368 a 646 c 548 g 394 t
ORIGIN
1 agcagaccct cgcccagcag ttaccgccgt cccgactttc cgttccagtt gcagctcctg
61 ccgggcaaca tgtcaagagc cgccgccgct acactgccgc cgccacctgg ggaagagcag
121 cagcagcagc ggcggccgcg ggcacacggg ggcaataaac cgagccaccc gggcgtccag
181 cgtgccgggg aaccctctct gcgctcactg cccggcggga cccacgccat gtgctgagcc
241 atgtccctgg ccgcgcccgc gggcagcgca tggggcagcg cctgagtggc ggcagatctt
301 gcctcgatgt ccccggccgg ctcctaccgc agccgccgcc gcccccgccg ccggtgagga
361 ggaagctcgc gctgctcttc gccatgctct gcgtctggct ctatatgttc ctgtactcgt
421 gcgccggctc ctgcgccgcc gcgccggggc tgctgctcct gggctctggg tcccgcgccg
481 cacacgaccc gccagccctg gccacagctc cggacgggac gccccccagg ctgccgttcc
541 gggcgccgcc agccacccca ctggcttcag gcaaggagat ggccgagggc gctgcgagcc
601 cggaggagca gagtcccgag gtgccggact ccccaagccc catctccagc tttttcagtg
661 ggtctgggag caagcagctg ccgcaggcca tcatcatcgg cgtgaagaag ggcggcacgc
721 gggcgctgct ggagtttctg cgcgtgcacc ccgacgtgcg cgccgtgggc gccgagcccc
781 atttcttcga tcgcagctac gacaagggcc tcgcttggta ccgggacctg atgcccagaa
841 ccctggacgg gcagatcacc atggagaaga cgcccagtta cttcgtcacg cgggaggccc
901 ccgcgcgcat ctcggccatg tccaaggaca ccaagctcat cgtggtggtg cgggacccgg
961 tgaccagggc catctcggac tacacgcaga cgctgtccaa gcggcccgac atccccacct
1021 tcgagagctt gacgttcaaa aacaggacag cgggcctcat cgacacgtcg tggagcgcca
1081 tccagatcgg catctacgcc aagcacctgg agcactggct gcgccacttc cccatccgcc
1141 agatgctctt cgtgagcggc gagcggctca tcagcgaccc ggccggggag ctgggccgcg
1201 tgcaagactt cctgggcctc aagaggatca tcacggacaa gcacttctac ttcaacaaga
1261 ccaagggctt cccctgcctg aagaaggcgg agggcagcag ccggccccat tgcctgggca
1321 agaccaaggg caggacccat cctgagatcg accgcgaggt ggtgcgcagg ctgcgcgagt
1381 tctaccggcc tttcaacctc aagttctacc agatgaccgg gcacgacttt ggctgggatt
1441 gagcagaccc gggctatgta ccttacccac gtggcttatc tattgacaga gattatatgt
1501 atgtaaaatg tacagaaatc tattttataa taatttattt ttaattcata agcaattaat
1561 tcactaagct gcctagccac actctttaga gagttagctt cataatctgt taacattcca
1621 aagtgtttaa ctctagtatt tcgttttctt cttcacaatt gatggtgctt ctattttttc
1681 ttctccccta cctgttatat ttaaaacaaa gaaaagcaca acttgagatt tttgttgtta
1741 cgggtattca gccttcagtc accgtctgag ttctccagtt gctgcctcct tgtcttgtct
1801 tgggtctccc attccagctt ccctgtctct tcctgcctgt gtacctcgta ggaacgctga
1861 gctgcctcaa cagggctgta ttctgaaggg caggcctcat gcagcagcct ccttgcagat
1921 gtggtgtccc gtccaatgat gtagcctgaa agccac
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