LOCUS       BC069710                 417 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens defensin, alpha 6, Paneth cell-specific, mRNA (cDNA
            clone MGC:97285 IMAGE:7262534), complete cds.
ACCESSION   BC069710
VERSION     BC069710.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 417)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRBR Plate: 5 Row: e Column: 12.
FEATURES             Location/Qualifiers
     source          1..417
                     /db_xref="H-InvDB:HIT000263861"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:97285 IMAGE:7262534"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_244"
                     /note="Vector: pPCR-Script Amp SK(+)"
     gene            1..417
                     /gene="DEFA6"
                     /gene_synonym="DEF6"
                     /gene_synonym="HD-6"
                     /db_xref="GeneID:1671"
                     /db_xref="HGNC:HGNC:2765"
                     /db_xref="MIM:600471"
     CDS             42..344
                     /gene="DEFA6"
                     /gene_synonym="DEF6"
                     /gene_synonym="HD-6"
                     /codon_start=1
                     /product="defensin, alpha 6, Paneth cell-specific"
                     /protein_id="AAH69710.1"
                     /db_xref="GeneID:1671"
                     /db_xref="HGNC:HGNC:2765"
                     /db_xref="MIM:600471"
                     /translation="MRTLTILTAVLLVALQAKAEPLQAEDDPLQAKAYEADAQEQRGA
                     NDQDFAVSFAEDASSSLRALGSTRAFTCHCRRSCYSTEYSYGTCTVMGINHRFCCL"
BASE COUNT          103 a          115 c           96 g          103 t
ORIGIN      
        1 acacatctgc tcctgctctc tctcctccag cgaccctagc catgagaacc ctcaccatcc
       61 tcactgctgt tctcctcgtg gccctccagg ccaaggctga gccactccaa gctgaggatg
      121 atccactgca ggcaaaagct tatgaggctg atgcccagga gcagcgtggg gcaaatgacc
      181 aggactttgc cgtctccttt gcagaggatg caagctcaag tcttagagct ttgggctcaa
      241 caagggcttt cacttgccat tgcagaaggt cctgttattc aacagaatat tcctatggga
      301 cctgcactgt catgggtatt aaccacagat tctgctgcct ctgagggatg agaacagaga
      361 gaaatatatt cataatttac tttatgacct agaaggaaac tgtcgtgtgt cccatac
//