LOCUS BC069664 1957 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase
3B1, mRNA (cDNA clone MGC:97234 IMAGE:7262483), complete cds.
ACCESSION BC069664
VERSION BC069664.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1957)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1957)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 5 Row: a Column: 9.
FEATURES Location/Qualifiers
source 1..1957
/db_xref="H-InvDB:HIT000263815"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97234 IMAGE:7262483"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1957
/gene="HS3ST3B1"
/gene_synonym="30ST3B1"
/gene_synonym="3OST3B1"
/db_xref="GeneID:9953"
/db_xref="HGNC:HGNC:5198"
/db_xref="MIM:604058"
CDS 271..1443
/gene="HS3ST3B1"
/gene_synonym="30ST3B1"
/gene_synonym="3OST3B1"
/codon_start=1
/product="heparan sulfate (glucosamine)
3-O-sulfotransferase 3B1"
/protein_id="AAH69664.1"
/db_xref="GeneID:9953"
/db_xref="HGNC:HGNC:5198"
/db_xref="MIM:604058"
/translation="MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWL
YMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALATAPDGTPPRLPFRAPPATPLASGK
EMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVH
PDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMS
KDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIY
AKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGF
PCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDFGWD"
BASE COUNT 368 a 646 c 549 g 394 t
ORIGIN
1 agcagaccct cgcccagcag ttaccgccgt cccgactttc cgttccagtt gcagctcctg
61 ccgggcaaca tgtcaagagc cgccgccgct acagctgccg ccgccacctg gggaagagca
121 gcagcagcag cggcggccgc gggcacacgg gggcaataaa ccgagccacc cgggcgtcca
181 gcgtgccggg gaaccctctc tgcgctcact gcccggcggg acccacgcca tgtgctgagc
241 catgtccctg gccgcgcccg cgggcagcgc atggggcagc gcctgagtgg cggcagatct
301 tgcctcgatg tccccggccg gctcctaccg cagccgccgc cgcccccgcc gccggtgagg
361 aggaagctcg cgctgctctt cgccatgctc tgcgtctggc tctatatgtt cctgtactcg
421 tgcgccggct cctgcgccgc cgcgccgggg ctgctgctcc tgggctctgg gtcccgcgcc
481 gcacacgacc cgccagccct ggccacagct ccggacggga cgccccccag gctgccgttc
541 cgggcgccgc cagccacccc actggcttca ggcaaggaga tggccgaggg cgctgcgagc
601 ccggaggagc agagtcccga ggtgccggac tccccaagcc ccatctccag ctttttcagt
661 gggtctggga gcaagcagct gccgcaggcc atcatcatcg gcgtgaagaa gggcggcacg
721 cgggcgctgc tggagtttct gcgcgtgcac cccgacgtgc gcgccgtggg cgccgagccc
781 catttcttcg atcgcagcta cgacaagggc ctcgcttggt accgggacct gatgcccaga
841 accctggacg ggcagatcac catggagaag acgcccagtt acttcgtcac gcgggaggcc
901 cccgcgcgca tctcggccat gtccaaggac accaagctca tcgtggtggt gcgggacccg
961 gtgaccaggg ccatctcgga ctacacgcag acgctgtcca agcggcccga catccccacc
1021 ttcgagagct tgacgttcaa aaacaggaca gcgggcctca tcgacacgtc gtggagcgcc
1081 atccagatcg gcatctacgc caagcacctg gagcactggc tgcgccactt ccccatccgc
1141 cagatgctct tcgtgagcgg cgagcggctc atcagcgacc cggccgggga gctgggccgc
1201 gtgcaagact tcctgggcct caagaggatc atcacggaca agcacttcta cttcaacaag
1261 accaagggct tcccctgcct gaagaaggcg gagggcagca gccggcccca ttgcctgggc
1321 aagaccaagg gcaggaccca tcctgagatc gaccgcgagg tggtgcgcag gctgcgcgag
1381 ttctaccggc ctttcaacct caagttctac cagatgaccg ggcacgactt tggctgggat
1441 tgagcagacc cgggctatgt accttaccca cgtggcttat ctattgacag agattatatg
1501 tatgtaaaat gtacagaaat ctattttata ataatttatt tttaattcat aagcaattaa
1561 ttcactaagc tgcctagcca cactctttag agagttagct tcataatctg ttaacattcc
1621 aaagtgttta actctagtat ttcgttttct tcttcacaat tgatggtgct tctatttttt
1681 cttctcccct acctgttata tttaaaacaa agaaaagcac aacttgagat ttttgttgtt
1741 acgggtattc agccttcagt caccgtctga gttctccagt tgctgcctcc ttgtcttgtc
1801 ttgggtctcc cattccagct tccctgtctc ttcctgcctg tgtacctcgt aggaacgctg
1861 agctgcctca acagggctgt attctgaagg gcaggcctca tgcagcagcc tccttgcaga
1921 tgtggtgtcc cgtccaatga tgtagcctga aagccac
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