LOCUS BC069626 1322 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens nuclear receptor subfamily 1, group I, member 3, mRNA
(cDNA clone MGC:97209 IMAGE:7262456), complete cds.
ACCESSION BC069626
VERSION BC069626.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1322)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1322)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 4 Row: g Column: 6.
FEATURES Location/Qualifiers
source 1..1322
/db_xref="H-InvDB:HIT000263777"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97209 IMAGE:7262456"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1322
/gene="NR1I3"
/gene_synonym="CAR"
/gene_synonym="CAR1"
/gene_synonym="MB67"
/gene_synonym="MGC150433"
/gene_synonym="MGC97209"
/db_xref="GeneID:9970"
/db_xref="HGNC:HGNC:7969"
/db_xref="MIM:603881"
CDS 157..1215
/gene="NR1I3"
/gene_synonym="CAR"
/gene_synonym="CAR1"
/gene_synonym="MB67"
/gene_synonym="MGC150433"
/gene_synonym="MGC97209"
/codon_start=1
/product="nuclear receptor subfamily 1, group I, member 3"
/protein_id="AAH69626.1"
/db_xref="GeneID:9970"
/db_xref="HGNC:HGNC:7969"
/db_xref="MIM:603881"
/translation="MASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIG
PTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQT
PVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQFRPPAHLFIHHQPLPTLAPVLPLVTH
FADINTFMVLQVIKFTKDLPVFRSLPIEDQISLLKGAAVEICHIVLNTTFCLQTQNFL
CGPLRYTIEDGARVSPTVGFQVEFLELLFHFHGTLRKLQLQEPEYVLLAAMALFSPDR
PGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDRFLYAKLLGLLAELRSINEAYGYQI
QHIQGLSAMMPLLQEICS"
BASE COUNT 317 a 370 c 354 g 281 t
ORIGIN
1 taactccaat cactggcaac tcctgagatc agaggaaaac cagcaacagc gtgggagttt
61 ggggagaggc attccatacc agattctgtg gcctgcaggt gacatgctgc ctaagagaag
121 caggagtctg tgacagccac cccaacacgt gacgtcatgg ccagtaggga agatgagctg
181 aggaactgtg tggtatgtgg ggaccaagcc acaggctacc actttaatgc gctgacttgt
241 gagggctgca agggtttctt caggagaaca gtcagcaaaa gcattggtcc cacctgcccc
301 tttgctggaa gctgtgaagt cagcaagact cagaggcgcc actgcccagc ctgcaggttg
361 cagaagtgct tagatgctgg catgaggaaa gacatgatac tgtcggcaga agccctggca
421 ttgcggcgag caaagcaggc ccagcggcgg gcacagcaaa cacctgtgca actgagtaag
481 gagcaagaag agctgatccg gacactcctg ggggcccaca cccgccacat gggcaccatg
541 tttgaacagt ttgtgcagtt taggcctcca gctcatctgt tcatccatca ccagcccttg
601 cccaccctgg cccctgtgct gcctctggtc acacacttcg cagacatcaa cactttcatg
661 gtactgcaag tcatcaagtt tactaaggac ctgcctgtct tccgttccct gcccattgaa
721 gaccagatct cccttctcaa gggagcagct gtggaaatct gtcacatcgt actcaatacc
781 actttctgtc tccaaacaca aaacttcctc tgcgggcctc ttcgctacac aattgaagat
841 ggagcccgtg tatctcccac agtggggttc caggtagagt ttttggagtt gctctttcac
901 ttccatggaa cactacgaaa actgcagctc caagagcctg agtatgtgct cttggctgcc
961 atggccctct tctctcctga ccgacctgga gttacccaga gagatgagat tgatcagctg
1021 caagaggaga tggcactgac tctgcaaagc tacatcaagg gccagcagcg aaggccccgg
1081 gatcggtttc tgtatgcgaa gttgctaggc ctgctggctg agctccggag cattaatgag
1141 gcctacgggt accaaatcca gcacatccag ggcctgtctg ccatgatgcc gctgctccag
1201 gagatctgca gctgaggcca tgctcacttc cttccccagc tcacctggaa caccctggat
1261 acactggagt gggaaaatgc tgggaccaaa gattgggccg ggttcaaagg gagcccagtg
1321 gt
//