LOCUS BC069601 1119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
clone MGC:97142 IMAGE:7262383), complete cds.
ACCESSION BC069601
VERSION BC069601.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 4 Row: a Column: 5.
FEATURES Location/Qualifiers
source 1..1119
/db_xref="H-InvDB:HIT000263752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97142 IMAGE:7262383"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1119
/gene="LMX1B"
/gene_synonym="LMX1.2"
/db_xref="GeneID:4010"
/db_xref="HGNC:HGNC:6654"
/db_xref="MIM:602575"
CDS 1..1119
/gene="LMX1B"
/gene_synonym="LMX1.2"
/codon_start=1
/product="LIM homeobox transcription factor 1, beta"
/protein_id="AAH69601.1"
/db_xref="GeneID:4010"
/db_xref="HGNC:HGNC:6654"
/db_xref="MIM:602575"
/translation="MLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQRPISDRF
LMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPT
EFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDE
SDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVS
SKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLS
SRMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGNDSIFHDIDSDTS
LTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS"
BASE COUNT 231 a 363 c 354 g 171 t
ORIGIN
1 atgttggacg gcatcaagat ggaggagcac gccctgcgcc ccgggcccgc cactctgggg
61 gtgctgctgg gctccgactg cccgcatccc gccgtctgcg agggctgcca gcggcccatc
121 tccgaccgct tcctgatgcg agtcaacgag tcgtcctggc acgaggagtg tttgcagtgc
181 gcggcgtgtc agcaagccct caccaccagc tgctacttcc gggatcggaa actgtactgc
241 aaacaagact accaacagct cttcgcggcc aagtgcagcg gctgcatgga gaagatcgcc
301 cccaccgagt tcgtgatgcg ggcgctggag tgcgtgtacc acctgggctg cttctgctgc
361 tgcgtgtgtg agcggcagct acgcaagggc gacgaattcg tgctcaagga gggccagctg
421 ctgtgcaagg gtgactacga gaaggagaag gacctgctca gctccgtgag ccccgacgag
481 tccgactccg tgaagagcga ggatgaagat ggggacatga agccggccaa ggggcagggc
541 agtcagagca agggcagcgg ggatgacggg aaggacccgc ggaggcccaa gcgaccccgg
601 accatcctca ccacgcagca gcgaagagcc ttcaaggcct ccttcgaggt ctcgtccaag
661 ccttgccgaa aggtccgaga gacactggca gctgagacgg gcctcagtgt gcgcgtggtc
721 caggtctggt ttcagaacca aagagcaaag atgaagaagc tggcgcggcg gcaccagcag
781 cagcaggagc agcagaactc ccagcggctg ggccaggagg tcctgtccag ccgcatggag
841 ggcatgatgg cttcctacac gccgctggcc ccaccacagc agcagatcgt ggccatggaa
901 cagagcccct acggcagcag cgaccccttc cagcagggcc tcacgccgcc ccaaatgcca
961 gggaacgact ccatcttcca tgacatcgac agcgatacct ccttaaccag cctcagcgac
1021 tgcttcctcg gctcctcaga cgtgggctcc ctgcaggccc gcgtggggaa ccccatcgac
1081 cggctctact ccatgcagag ttcctacttc gcctcctga
//