LOCUS BC069588 1135 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
clone IMAGE:7262466), partial cds.
ACCESSION BC069588
VERSION BC069588.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1135)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 4 Row: h Column: 4.
FEATURES Location/Qualifiers
source 1..1135
/db_xref="H-InvDB:HIT000263739"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:7262466"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene <1..1135
/gene="LMX1B"
/gene_synonym="LMX1.2"
/db_xref="GeneID:4010"
/db_xref="HGNC:HGNC:6654"
/db_xref="MIM:602575"
CDS <1..1135
/gene="LMX1B"
/gene_synonym="LMX1.2"
/codon_start=2
/product="LMX1B protein"
/protein_id="AAH69588.1"
/db_xref="GeneID:4010"
/db_xref="HGNC:HGNC:6654"
/db_xref="MIM:602575"
/translation="DGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQRPISDRFLM
RVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEF
VMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESD
SVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSK
PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSSR
MEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGDHMNPYGNDSIFHDI
DSDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS"
BASE COUNT 236 a 370 c 357 g 172 t
ORIGIN
1 ggacggcatc aagatggagg agcacgccct gcgccccggg cccgccactc tgggggtgct
61 gctgggctcc gactgcccgc atcccgccgt ctgcgagggc tgccagcggc ccatctccga
121 ccgcttcctg atgcgagtca acgagtcgtc ctggcacgag gagtgtttgc agtgcgcggc
181 gtgtcagcaa gccctcacca ccagctgcta cttccgggat cggaaactgt actgcaaaca
241 agactaccaa cagctcttcg cggccaagtg cagcggctgc atggagaaga tcgcccccac
301 cgagttcgtg atgcgggcgc tggagtgcgt gtaccacctg ggctgcttct gctgctgcgt
361 gtgtgagcgg cagctacgca agggcgacga attcgtgctc aaggagggcc agctgctgtg
421 caagggtgac tacgagaagg agaaggacct gctcagctcc gtgagccccg acgagtccga
481 ctccgtgaag agcgaggatg aagatgggga catgaagccg gccaaggggc agggcagtca
541 gagcaagggc agcggggatg acgggaagga cccgcggagg cccaagcgac cccggaccat
601 cctcaccacg cagcagcgaa gagccttcaa ggcctccttc gaggtctcgt ccaagccttg
661 ccgaaaggtc cgagagacac tggcagctga gacgggcctc agtgtgcgcg tggtccaggt
721 ctggtttcag aaccaaagag caaagatgaa gaagctggcg cggcggcacc agcagcagca
781 ggagcagcag aactcccagc ggctgggcca ggaggtcctg tccagccgca tggagggcat
841 gatggcttcc tacacgccgc tggccccacc acagcagcag atcgtggcca tggaacagag
901 cccctacggc agcagcgacc ccttccagca gggcctcacg ccgccccaaa tgccaggtga
961 ccacatgaac ccctatggga acgactccat cttccatgac atcgacagcg atacctcctt
1021 aaccagcctc agcgactgct tcctcggctc ctcagacgtg ggctccctgc aggcccgcgt
1081 ggggaacccc atcgaccggc tctactccat gcagagttcc tacttcgcct cctga
//