LOCUS BC069571 1734 bp mRNA linear HUM 19-AUG-2004
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 5, mRNA (cDNA clone MGC:97118 IMAGE:7262347), complete cds.
ACCESSION BC069571
VERSION BC069571.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 3 Row: f Column: 5.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000263722"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97118 IMAGE:7262347"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1734
/gene="KCNJ5"
/gene_synonym="CIR"
/gene_synonym="GIRK4"
/gene_synonym="KATP1"
/gene_synonym="KIR3.4"
/db_xref="GeneID:3762"
/db_xref="MIM:600734"
CDS 353..1612
/gene="KCNJ5"
/gene_synonym="CIR"
/gene_synonym="GIRK4"
/gene_synonym="KATP1"
/gene_synonym="KIR3.4"
/codon_start=1
/product="KCNJ5 protein"
/protein_id="AAH69571.1"
/db_xref="GeneID:3762"
/db_xref="MIM:600734"
/translation="MAGDSRNAMNQDMEIGVTPWDPKKIPKQARDYVPIATDRTRLLA
EGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWL
FFGFIWWLIAYIRGDLDHVGDQEWIPCVENLSGFVSAFLFSIETETTIGYGFRVITEK
CPEGIILLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLM
FRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLII
SHEINEKSPFWEMSQAQLHQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFT
PVLTLEKGFYEVDYNTFHDTYETNTPSCCAKELAEMKREGRLLQYLPSPPLLGGCAEA
GLDAEAEQNEEDEPKGLGGSREARGSV"
BASE COUNT 393 a 488 c 511 g 342 t
ORIGIN
1 gagagagatt gttccagctg ctctcgctag agaaagggag tgacccaagg ggccgcgagt
61 gaagggacag gatggcttag gtacctctgc ccacaggacc ccacaacagg gagaggttcc
121 agctacagct cctccgtggg gtcatggcag gggctgggga gtcccctcaa aagccctgag
181 cccccctgca ccgccgctaa gggacacccc agaagttagc atcagtggga ctcggaagct
241 ccgatctcaa caaggccaga agctcataga actttctgaa gggagcaggt catcagcctt
301 agcatgagtc ccggagcatc agtgtctgct ggccgttgtg tgcatcccag ctatggctgg
361 cgattctagg aatgccatga accaggacat ggagattgga gtcactccct gggaccccaa
421 gaagattcca aaacaggccc gcgattatgt ccccattgcc acagaccgta cgcgcctgct
481 ggccgagggc aagaagccac gccagcgcta catggagaag agcggcaagt gcaacgtgca
541 ccacggcaac gtccaggaga cctaccggta cctgagtgac ctcttcacca ccctggtgga
601 cctcaagtgg cgcttcaact tgctcgtctt caccatggtt tacactgtca cctggctgtt
661 cttcggcttc atttggtggc tcattgctta tatccggggt gacctggacc atgttggcga
721 ccaagagtgg attccttgtg ttgaaaacct cagtggcttc gtgtccgctt tcctgttctc
781 cattgagacc gaaacaacca ttgggtatgg cttccgagtc atcacagaga agtgtccaga
841 ggggattata ctcctcttgg tccaggccat cctgggctcc atcgtcaatg ccttcatggt
901 ggggtgcatg tttgtcaaga tcagccagcc caagaagaga gcggagaccc tcatgttttc
961 caacaacgca gtcatctcca tgcgggacga gaagctgtgc ctcatgttcc gggtgggcga
1021 cctccgcaac tcccacatcg tggaggcctc catccgggcc aagctcatca agtcccggca
1081 gaccaaagag ggggagttca tccccctgaa ccagacagac atcaacgtgg gctttgacac
1141 gggcgacgac cgcctcttcc tggtgtctcc tctgatcatc tcccacgaga tcaacgagaa
1201 gagccctttc tgggagatgt ctcaggctca gctgcatcag gaagagtttg aagttgtggt
1261 cattctagaa gggatggtgg aagccacagg catgacctgc caagcccgga gctcctacat
1321 ggatacagag gtgctctggg gccaccgatt cacaccagtc ctcaccttgg aaaagggctt
1381 ctatgaggtg gactacaaca ccttccatga tacctatgag accaacacac ccagctgctg
1441 tgccaaggag ctggcagaaa tgaagaggga aggccggctc ctccagtacc tccccagccc
1501 cccactgctg gggggctgtg ctgaggcagg gctggatgca gaggctgagc agaatgaaga
1561 agatgagccc aaggggctgg gtgggtccag ggaggccagg ggctcggtgt gaggggtgca
1621 gcctccctaa gacctcctgt cactggcttc agtgaacaca gacactgcag agcctgggag
1681 caggggaggg gaatagttga gtgtgctgtt tgggggctca ggagccatca aggc
//