LOCUS BC069482 1648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 5, mRNA (cDNA clone MGC:97134 IMAGE:7262371), complete cds.
ACCESSION BC069482
VERSION BC069482.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 3 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..1648
/db_xref="H-InvDB:HIT000263633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97134 IMAGE:7262371"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1648
/gene="KCNJ5"
/gene_synonym="CIR"
/gene_synonym="GIRK4"
/gene_synonym="KATP1"
/gene_synonym="KIR3.4"
/db_xref="GeneID:3762"
/db_xref="HGNC:HGNC:6266"
/db_xref="MIM:600734"
CDS 267..1526
/gene="KCNJ5"
/gene_synonym="CIR"
/gene_synonym="GIRK4"
/gene_synonym="KATP1"
/gene_synonym="KIR3.4"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 5"
/protein_id="AAH69482.1"
/db_xref="GeneID:3762"
/db_xref="HGNC:HGNC:6266"
/db_xref="MIM:600734"
/translation="MAGDSRNAMNQDMEIGVTPWDPKKIPKQARDYVPIATDRTRLLA
EGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWL
FFGFIWWLIAYIRGDLDHVGDQEWIPCVENLSGFVSAFLFSIETETTIGYGFRVITEK
CPEGIILLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLM
FRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLII
SHEINEKSPFWEMSQAQLHQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFT
PVLTLEKGFYEVDYNTFHDTYETNTPSCCAKELAEMKREGRLLQYLPSPPLLGGCAEA
GLDAEAEQNEEDEPKGLGGSREARGSV"
BASE COUNT 376 a 467 c 484 g 321 t
ORIGIN
1 agagagagag attgttccag ctgctctcgc tagagaaagg gagtgaccca aggggccgcg
61 agtgaaggga caggatggct taggtacctc tgcccacagg accccacaac agggagaggt
121 tccagctaca gctcctccgt ggggtcatgg caggggctgg ggagtcccct caaaagccct
181 gagcccccct gcaccgccgc taagggacac cccagaagtt agcatcagtg ggactcggaa
241 gctccgatct caacaacatc ccagctatgg ctggcgattc taggaatgcc atgaaccagg
301 acatggagat tggagtcact ccctgggacc ccaagaagat tccaaaacag gcccgcgatt
361 atgtccccat tgccacagac cgtacgcgcc tgctggccga gggcaagaag ccacgccagc
421 gctacatgga gaagagcggc aagtgcaacg tgcaccacgg caacgtccag gagacctacc
481 ggtacctgag tgacctcttc accaccctgg tggacctcaa gtggcgcttc aacttgctcg
541 tcttcaccat ggtttacact gtcacctggc tgttcttcgg cttcatttgg tggctcattg
601 cttatatccg gggtgacctg gaccatgttg gcgaccaaga gtggattcct tgtgttgaaa
661 acctcagtgg cttcgtgtcc gctttcctgt tctccattga gaccgaaaca accattgggt
721 atggcttccg agtcatcaca gagaagtgtc cagaggggat tatactcctc ttggtccagg
781 ccatcctggg ctccatcgtc aatgccttca tggtggggtg catgtttgtc aagatcagcc
841 agcccaagaa gagagcggag accctcatgt tttccaacaa cgcagtcatc tccatgcggg
901 acgagaagct gtgcctcatg ttccgggtgg gcgacctccg caactcccac atcgtggagg
961 cctccatccg ggccaagctc atcaagtccc ggcagaccaa agagggggag ttcatccccc
1021 tgaaccagac agacatcaac gtgggctttg acacgggcga cgaccgcctc ttcctggtgt
1081 ctcctctgat catctcccac gagatcaacg agaagagccc tttctgggag atgtctcagg
1141 ctcagctgca tcaggaagag tttgaagttg tggtcattct agaagggatg gtggaagcca
1201 caggcatgac ctgccaagcc cggagctcct acatggatac agaggtgctc tggggccacc
1261 gattcacacc agtcctcacc ttggaaaagg gcttctatga ggtggactac aacaccttcc
1321 atgataccta tgagaccaac acacccagct gctgtgccaa ggagctggca gaaatgaaga
1381 gggaaggccg gctcctccag tacctcccca gccccccact gctggggggc tgtgctgagg
1441 cagggctgga tgcagaggct gagcagaatg aagaagatga gcccaagggg ctgggtgggt
1501 ccagggaggc caggggctcg gtgtgagggg tgcagcctcc ctaagacctc ctgtcactgg
1561 cttcagtgaa cacagacact gcagagcctg ggagcagggg aggggaatag ttgagtgtgc
1621 tgtttggggg ctcaggagcc atcaaggc
//