LOCUS BC069347 1536 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens amylase, alpha 1A (salivary), mRNA (cDNA clone
MGC:97082 IMAGE:7262297), complete cds.
ACCESSION BC069347
VERSION BC069347.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1536)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBR Plate: 3 Row: b Column: 3.
FEATURES Location/Qualifiers
source 1..1536
/db_xref="H-InvDB:HIT000263499_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:97082 IMAGE:7262297"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_277"
/note="Vector: pPCR-Script Amp SK(+) with reversed insert"
gene 1..1536
/gene="AMY1A"
/gene_synonym="AMY1B"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
CDS 1..1536
/gene="AMY1A"
/gene_synonym="AMY1B"
/codon_start=1
/product="amylase, alpha 1A (salivary)"
/protein_id="AAH69347.1"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
/translation="MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECE
RYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCN
NVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGS
GDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMW
PGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAK
LGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDAR
LYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTT
CGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWT
FSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAE
SKL"
BASE COUNT 443 a 263 c 376 g 454 t
ORIGIN
1 atgaagctct tttggttgct tttcaccatt gggttctgct gggctcagta ttcctcaaat
61 acacaacaag gacgaacatc tattgttcat ctgtttgaat ggcgatgggt tgatattgct
121 cttgaatgtg agcgatattt agctcccaag ggatttggag gggttcaggt ctctccacca
181 aatgaaaatg ttgccattca caaccctttc agaccttggt gggaaagata ccaaccagtt
241 agctataaat tatgcacaag atctggaaat gaagatgaat ttagaaacat ggtgactaga
301 tgcaacaatg ttggggttcg tatttatgtg gatgctgtaa ttaatcatat gtgtggtaat
361 gctgtgagtg caggaacaag cagtacctgt ggaagttact tcaaccctgg aagtagggac
421 tttccagcag tcccatattc tggatgggat tttaatgatg gtaaatgtaa aactggaagt
481 ggagatatcg agaactataa tgatgctact caggtcagag attgtcgtct gtctggtctt
541 ctcgatcttg cactggggaa ggattatgtg cgttctaaga ttgccgaata tatgaaccat
601 ctcattgaca ttggtgttgc agggttcaga attgatgctt ccaagcacat gtggcctgga
661 gacataaagg caattttgga caaactgcat aatctaaaca gtaactggtt cccggaaggt
721 agtaaacctt tcatttacca ggaggtaatt gatctgggtg gtgagccaat taaaagcagt
781 gactactttg gtaatggccg ggtgacagaa ttcaagtatg gtgcaaaact cggcacagtt
841 attcgcaagt ggaatggaga gaagatgtct tacttaaaga actggggaga aggttggggt
901 ttcatgcctt ctgacagagc gcttgtcttt gtggataacc atgacaatca acgaggacat
961 ggcgctggag gagcctctat acttaccttc tgggatgcta ggctgtacaa aatggcagtt
1021 ggatttatgc ttgctcatcc ttatggattt acacgagtaa tgtcaagcta ccgttggcca
1081 agatattttg aaaatggaaa agatgttaat gattgggttg ggccaccaaa tgataatgga
1141 gtaactaaag aagttactat taatccagac actacttgtg gcaatgactg ggtctgtgaa
1201 catcgatggc gccaaataag gaacatggtt aatttccgca atgtagtgga tggccagcct
1261 tttacaaact ggtatgataa tgggagcaac caagtggctt ttgggagagg aaacagagga
1321 ttcattgttt tcaacaatga tgactggaca ttttctttaa ctttgcaaac tggtcttcct
1381 gctggcacat actgtgatgt catttctgga gataaaatta atggcaactg cacaggcatt
1441 aaaatctacg tttctgatga tggcaaagct catttttcta ttagtaactc tgctgaagat
1501 ccatttattg caattcatgc tgaatctaaa ttgtaa
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