LOCUS BC069264 1567 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class I, type 8B, member 2, mRNA (cDNA clone
IMAGE:6463955), complete cds.
ACCESSION BC069264
VERSION BC069264.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1567)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1567)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: o Column: 8
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1567
/db_xref="H-InvDB:HIT000263418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6463955"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1567
/gene="ATP8B2"
/gene_synonym="ATPID"
/gene_synonym="DKFZp434M0219"
/db_xref="GeneID:57198"
/db_xref="HGNC:HGNC:13534"
/db_xref="MIM:605867"
CDS 188..1351
/gene="ATP8B2"
/gene_synonym="ATPID"
/gene_synonym="DKFZp434M0219"
/codon_start=1
/product="ATPase, class I, type 8B, member 2"
/protein_id="AAH69264.1"
/db_xref="GeneID:57198"
/db_xref="HGNC:HGNC:13534"
/db_xref="MIM:605867"
/translation="MAVCAKKRPPEEERRARANDREYNEKFQYASNCIKTSKYNILTF
LPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYF
RHKSDNQVNNRQSQVLINGILQQEQWMNVCVGDIIKLENNQFVAADLLLLSSSEPHGL
CYIETAELDGETNMKVRQAIPVTSELGDISKLAKFDGEVICEPPNNKLDKFSGTLYWK
ENKFPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTL
VLWIFGFLVCMGVILAIGNAIWEHEVGMRFQVYLPWDEAVDSAFFSGFLSFWSYIIIL
NTVVPISLYVRYVPSLTWGLSRESGGPIELFFSMKMKSLRSNEKSSSSCTVNI"
BASE COUNT 410 a 383 c 402 g 372 t
ORIGIN
1 cacaaagtag cgggccgagg ccccggggga gcggggccgc agctgggggg gcgggagccc
61 gtggggagcc gagccgagcg ccccccgccc cagcccccgg catgggcagt acggggccgc
121 cggggcgggc gccgagcgct gagcgctgag ggtctcccat gggattgctg ggatcttgct
181 gggtgagatg gcagtgtgtg caaaaaagcg ccccccagaa gaagaaagga gggcgcgggc
241 taatgaccga gaatacaatg agaaattcca gtatgcgagt aactgcatca agacctccaa
301 gtacaatatt ctcaccttcc tgcctgtcaa cctctttgag cagttccagg aagttgccaa
361 cacttacttc ctgttcctcc tcattctgca gttgatcccc cagatctctt ccctgtcctg
421 gttcaccacc attgtgcctt tggttcttgt cctcaccatc acagctgtta aagatgccac
481 tgatgactat ttccgccaca agagcgataa ccaggtgaat aaccgccagt ctcaggtgct
541 gatcaatgga atcctccagc aggagcagtg gatgaatgtc tgtgttggtg atattatcaa
601 gctagaaaat aaccagtttg tggcggcgga tctcctcctc ctttccagca gtgagcccca
661 tgggctgtgt tacatagaga cagcagaact tgatggcgag accaacatga aagtacgtca
721 ggcgattcca gtcacctcag aattgggaga catcagtaag cttgccaagt ttgacggtga
781 agtgatctgt gaacctccca acaacaaact ggacaaattc agcggaaccc tctactggaa
841 ggaaaataag ttccctctga gcaaccagaa catgctgctg cggggctgtg tgctgcgaaa
901 caccgagtgg tgcttcgggc tggtcatctt tgcaggtccc gacactaagc tgatgcaaaa
961 cagcggcaga acaaagttca aaagaacgag tatcgatcgc ctaatgaata ccctggtgct
1021 ctggattttt ggattcctgg tttgcatggg ggtgatcctg gccattggca atgccatctg
1081 ggagcacgag gtggggatgc gtttccaggt ctacctgccg tgggatgagg cagtggacag
1141 tgccttcttc tctggcttcc tctccttctg gtcctacatc atcatcctca acaccgttgt
1201 gcccatttca ctctatgtca ggtatgtgcc ttctctgacc tggggtctgt ccagggagtc
1261 aggcggtccc atagaacttt tcttttctat gaagatgaag tccttgagaa gtaacgagaa
1321 gtcctcttct tcctgtactg taaacatttg atgttatctg tttatctttg tgggcagagc
1381 aaacttttta ccacagtttc ctggtacttg ggactgtatt agagaaaaaa aaatattgat
1441 ttattcagca cctatttatt acatgcctac tgtgtacaaa gaagtgtgct aggtgccatc
1501 acaaataaaa gatgaattag gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaa
//