LOCUS BC069262 3030 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens integrator complex subunit 1, mRNA (cDNA clone
IMAGE:6378033), partial cds.
ACCESSION BC069262
VERSION BC069262.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3030
/db_xref="H-InvDB:HIT000263416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6378033"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3030
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/db_xref="GeneID:26173"
CDS <1..2704
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/codon_start=2
/product="INT1 protein"
/protein_id="AAH69262.1"
/db_xref="GeneID:26173"
/translation="EVQHERGASGGQTFHSLLTASLPPRRDSTEAPKPKSSPEQPIGQ
GRIRVGTQLRVLGPEDDLAGMFLQIFPLSPDPRWQSSSPRPVALALQQALGQELARVV
QGSPEVPGITVRVLQALATLLSSPHGGALVMSMHRSHFLACPLLRQLCQYQRCVPQDT
GFSSLFLKVLLQMLQWLDSPGVEGGPLRAQLRMLASQASAGRRLSDVRGGLLRLAEAL
AFRQDLEVVSSTVRAVIATLRSGEQCSVEPDLISKVLQGLIEVRSPHLEELLTAFFSA
TADAASPFPACKPVVVVSSLLLQEEEPLAGGKPGADGGSLEAVRLGPSSGLLVDWLEM
LDPEVVSSCPDLQLRLLFSRRKGKGQAQVPSFRPYLLTLFTHQSSWPTLHQCIRVLLG
KSREQRFDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQGPELISLVELIL
AEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTEHLSGCIQQWGDSVLGRR
CRDLLLQLYLQRPELRVPVPEVLLHSEGAASSSVCKLDGLIHRFITLLADTSDSRALE
NRGADASMACRKLAVAHPLLLLRHLPMIAALLHGRTHLNFQEFRQQNHLSCFLHVLGL
LELLQPHVFRSEHQGALWDCLLSFIRLLLNYRKSSRHLAAFINKFVQFIHKYITYNAP
AAISFLQKHADPLHDLSFDNSDLVMLKSLLAGLSLPSRDDRTDRGLDEEGEEESSAGS
LPLVSVSLFTPLTAAEMAPYMKRLSRGQTVEDLLEVLSDIDEMSRRRPEILSFFSTNL
QRLMSSAEECCRNLAFSLALRSMQNSPSIAAAFLPTFMYCLGSQDFEVVQTALRNLPE
YALLCQEHAAVLLHRAFLVGMYGQMDPSAQISEALRILHMEAVM"
BASE COUNT 503 a 1045 c 968 g 514 t
ORIGIN
1 ggaggtccag catgagcgcg gcgcctccgg aggccagact ttccactcct tgctcacagc
61 ctccctgccg ccccgccgag acagcacaga ggcacccaaa ccaaagagca gcccagagca
121 gcccataggc cagggccgga ttcgggtggg gacccagctc cgggtgctgg gccctgagga
181 cgacctggct ggcatgttcc tccagatttt cccgctcagc ccggaccctc ggtggcagag
241 ctccagtccc cgccccgtgg ccctcgccct gcagcaggcc ctgggccagg agctggcccg
301 cgtcgtccag ggcagccccg aggtgccggg catcacggtg cgtgtcctgc aggccctcgc
361 caccctgctc agctccccac acggcggtgc cctggtgatg tccatgcacc gtagccactt
421 cctggcctgc ccgctgctgc gccagctctg ccagtaccag cgctgtgtgc cacaggacac
481 cggcttctcc tcgctcttcc tgaaggtgct cctgcagatg ctgcagtggc tggacagccc
541 tggcgtggag ggcgggcccc tgcgggcaca gctcaggatg cttgccagcc aggcctcagc
601 cgggcgcagg ctcagtgatg tgcgaggggg gctcctgcgc ctggccgagg ccctggcctt
661 ccgtcaggac ctggaggtgg tcagctccac cgtccgtgcc gtcatcgcca ccctgaggtc
721 tggggagcag tgcagcgtgg agccggacct gatcagcaaa gtcctccagg ggctgatcga
781 ggtgaggtcc ccccacctgg aggagctgct gactgcattc ttctctgcca ctgcggatgc
841 tgcctccccg tttccagcct gtaagcccgt tgtggtggtg agctccctgc tgctgcagga
901 ggaggagccc ctggctgggg ggaagccggg tgcggacggt ggcagcctgg aggccgtgcg
961 gctggggccc tcgtcaggcc tcctagtgga ctggctggaa atgctggacc ccgaggtggt
1021 cagcagctgc cccgacctgc agctcaggct gctcttctcc cggaggaagg gcaaaggtca
1081 ggcccaggtg ccctcgttcc gtccctacct cctgaccctc ttcacgcatc agtccagctg
1141 gcccacactg caccagtgca tccgagtcct gctgggcaag agccgggaac agaggttcga
1201 cccctctgcc tctctggact tcctctgggc ctgcatccat gttcctcgca tctggcaggg
1261 gcgggaccag cgcaccccgc agaagcggcg ggaggagctg gtgctgcggg tccagggccc
1321 ggagctcatc agcctggtgg agctgatcct ggccgaggcg gagacgcgga gccaggacgg
1381 ggacacagcc gcctgcagcc tcatccaggc ccggctgccc ctgctgctca gctgctgctg
1441 tggggacgat gagagtgtca ggaaggtgac ggagcacctg tcaggctgca tccagcagtg
1501 gggagacagc gtgctgggca ggcgctgccg agaccttctc ctgcagctct acctacagcg
1561 gccggagctg cgggtgcccg tgcctgaggt cctactgcac agcgaagggg ctgccagcag
1621 cagcgtctgc aagctggacg gactcatcca ccgcttcatc acgctccttg cggacaccag
1681 cgactcccgg gcgttggaga accgaggggc ggatgccagc atggcctgcc ggaagctggc
1741 ggtggcgcac ccgctgctgc tgctcaggca cctgcccatg atcgcggcgc tcctgcacgg
1801 ccgcacccac ctcaacttcc aggagttccg gcagcagaac cacctgagct gcttcctgca
1861 cgtgctgggc ctgctggagc tgctgcagcc gcacgtgttc cgcagcgagc accagggggc
1921 gctgtgggac tgccttctgt ccttcatccg cctgctgctg aattacagga agtcctcccg
1981 ccatctggct gccttcatca acaagtttgt gcagttcatc cataagtaca ttacctacaa
2041 tgccccagca gccatctcct tcctgcagaa gcacgccgac ccgctccacg acctgtcctt
2101 cgacaacagt gacctggtga tgctgaaatc cctccttgca gggctcagcc tgcccagcag
2161 ggacgacagg accgaccgag gcctggacga agagggcgag gaggagagct cagccggctc
2221 cttgcccctg gtcagcgtct ccctgttcac ccctctgacc gcggccgaga tggcccccta
2281 catgaaacgg ctttcccggg gccaaacggt ggaggatctg ctggaggttc tgagtgacat
2341 agacgagatg tcccggcgga gacccgagat cctgagcttc ttctcgacca acctgcagcg
2401 gctgatgagc tcggccgagg agtgttgccg caacctcgcc ttcagcctgg ccctgcgctc
2461 catgcagaac agccccagca ttgcagccgc tttcctgccc acgttcatgt actgcctggg
2521 cagccaggac tttgaggtgg tgcagacggc cctccggaac ctgcctgagt acgctctcct
2581 gtgccaagag cacgcggctg tgctgctcca ccgggccttc ctggtgggca tgtacggcca
2641 gatggacccc agcgcgcaga tctccgaggc cctgaggatc ctgcatatgg aggccgtgat
2701 gtgagcctgt ggcagccgac ccccctccaa gccccggccc gtcccgtccc cggggatcct
2761 cgaggcaaag cccaggaagc gtgggcgttg ctggtctgtc cgaggaggtg agggcgccga
2821 gccctgaggc caggcaggcc caggagcaat actccgagcc ctggggtggc tccgggccgg
2881 ccgctggcat caggggccgt ccagcaagcc ctcattcacc ttctgggcca cagccctgcc
2941 gcggagcggc ggatcccccc gggcatggcc tgggctggtt ttgaatgaaa cgacctgaac
3001 tgtcaaaaaa aaaaaaaaaa aaaaaaaaaa
//