LOCUS       BC069209                2787 bp    mRNA    linear   HUM 30-JAN-2008
DEFINITION  Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone
            IMAGE:5434191).
ACCESSION   BC069209
VERSION     BC069209.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2787)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-APR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 54 Row: f Column: 5
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 41872576.
FEATURES             Location/Qualifiers
     source          1..2787
                     /db_xref="H-InvDB:HIT000263369"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5434191"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_99"
                     /lab_host="DH10B"
                     /note="Vector: pOTB7"
     gene            <1..2787
                     /gene="RFTN1"
                     /gene_synonym="MIG2"
                     /gene_synonym="PIB10"
                     /gene_synonym="PIG9"
                     /gene_synonym="RAFTLIN"
                     /db_xref="GeneID:23180"
                     /db_xref="HGNC:HGNC:30278"
     CDS             <1..1796
                     /gene="RFTN1"
                     /gene_synonym="MIG2"
                     /gene_synonym="PIB10"
                     /gene_synonym="PIG9"
                     /gene_synonym="RAFTLIN"
                     /codon_start=3
                     /product="raftlin, lipid raft linker 1"
                     /protein_id="AAH69209.1"
                     /db_xref="GeneID:23180"
                     /db_xref="HGNC:HGNC:30278"
                     /translation="CLREPATAPSPPPVPYAAEMGCGLNKLEKRDEKRPGNIYSTLKR
                     PQVETKIDVSYEYRFLEFTTLSAAELPGSSAVRLASLRDLPAQLLELYQQGFSLAALH
                     PFVQPTHEREKTPLEHIFRAILIKKTDRSQKTDLHNEGYILELDCCSSLDHPTDQKLI
                     PEFIKKIQEAASQGLKFVGVIPQYHSSVNSAGSSAPVSTANSTEDARDAKNARGDHAS
                     LENEKPGTGDVSSAPAGRNQSPEPSSGPRGEVPLAKQPSSPSGEGDGGELSPQGVSKT
                     LDGPESNPLEVHEEPLSGKMEIFTLFNKPKSHQKCRQYYPVTIPLHVSKNGQTVSGLD
                     ANWLEHMSDHFRKGGMLVNAVFYLGIVNDSLHGLTDGVFIFEVVSTEDSKTIQGYDAI
                     VVEQWTVLEGVEVQTDYVPLLNSLAAYGWQLTCVLPTPVVKTTSEGSVSTKQIVFLQR
                     PCLPQKIKKKESKFQWRFSREEMHNRQMRKSKGKLSARDKQQAEENEKNLEDQSSKAG
                     DMGNCVSGQQQEGGVSEEMKGPVQEDKGEQLSPGGLLCGVGVEGEAVQNGPASHSRAL
                     VGICTGHSNPGEDARDGDAEEVRELGTVEEN"
BASE COUNT          715 a          700 c          744 g          628 t
ORIGIN      
        1 gctgcctcag ggagcccgcg accgcgcctt ctcctccgcc ggtcccatac gctgctgaaa
       61 tgggttgcgg attgaacaag ttagagaaac gtgatgaaaa acggcctggg aatatttatt
      121 caactttgaa gaggcctcag gtggaaacca agatagatgt gtcctatgaa taccgcttcc
      181 tggagttcac gactctgagt gctgcggagc tccctgggtc ctcagcagtg aggctggcct
      241 ccctgcgtga cctgcccgcc cagctcctgg agctgtacca gcagggcttc tcgctggcgg
      301 ccctgcaccc cttcgtgcag cccacccatg agcgggagaa gacgcccctg gagcacatct
      361 ttagagccat cctgatcaag aaaaccgaca gatctcagaa aactgatctt cacaatgaag
      421 gctacatctt ggaattagat tgctgttcct ccttagacca cccgacagac cagaaactca
      481 tcccagagtt cattaagaag atccaggagg ctgcaagcca gggcctgaaa ttcgttggtg
      541 ttatacctca gtaccattcc tctgtgaact cggcaggcag cagtgctccg gtgtctactg
      601 ccaacagcac cgaggatgcc agagatgcaa aaaacgcacg tggggatcac gcgtcactgg
      661 agaatgagaa accggggact ggggatgtga gcagtgctcc ggctgggaga aaccaaagcc
      721 cagagcccag ctcaggcccc agaggggagg tgcccctcgc caagcagccc agctcaccct
      781 ccggagaggg agatggtgga gaactttcac cacagggggt gagcaagaca ctggatggac
      841 cggagagcaa ccccttggag gtgcatgaag agccactctc agggaaaatg gagatcttca
      901 cccttttcaa caaaccgaag agccatcaga agtgccggca atactaccct gtcaccattc
      961 ctctccatgt ctccaagaat ggccagacag tgagcggttt ggacgccaac tggttagagc
     1021 acatgagcga ccacttccgg aaaggaggca tgctggtgaa cgcagtcttc taccttggaa
     1081 tagtgaatga ttccttacat ggcttgacag atggagtatt catctttgaa gttgtttcca
     1141 cagaagatag caaaaccata cagggctatg atgctattgt ggttgaacaa tggacagtcc
     1201 tggaaggtgt cgaagtgcag acagactacg tgcccctgct gaactcgctg gcggcctatg
     1261 gctggcagct cacctgtgtg ctaccaactc ccgtcgtcaa gactaccagc gaggggagtg
     1321 tatccaccaa gcagattgtc tttcttcaga gaccgtgtct acctcagaaa atcaagaaga
     1381 aggaatcgaa gtttcagtgg cgattctcca gagaagaaat gcacaacagg cagatgagga
     1441 aatcaaaagg taaactcagt gccagagaca aacaacaagc agaagaaaat gagaagaact
     1501 tagaagacca gtcttccaaa gctggagaca tgggaaactg tgtttcggga cagcagcagg
     1561 agggtggagt ctccgaggag atgaagggcc ctgtccaaga ggacaaggga gaacagctgt
     1621 cccctggtgg cctgctgtgt ggggtgggtg tggagggtga ggctgtgcag aatggtcctg
     1681 ccagccacag cagggccctg gtggggattt gcactgggca ctccaatcct ggagaggatg
     1741 ccagggacgg ggatgctgag gaagtcagag agcttggtac ggttgaagaa aactgagtct
     1801 tgggcaattt gtgctaaaac taggtgagtt gccaaaccca aggcatctta ccaacagctg
     1861 gtttgggggc tggtttccct ggtgttgtgt gttacctacc ctttggcttg gcttgacctc
     1921 tccttgtgag ctcacctgag ccctcccagg gccaggttcc tgacagtgtt ggtttttgca
     1981 catccactgg aaaggtgtca ttaatgaccc agtgttagaa tgcaagaggt caggttattc
     2041 tagccctcat ggctgaaggc ccagtcctgg ctccaccact cctccagcca gagggtctgg
     2101 accatccagt gcctgtcctc gccacagggc ctccagggag cattcgggtc aattccatgg
     2161 acaccctggg ctacaaacca aggctgctgt tcatcccaca tcgtgtgggg cagtgtccat
     2221 cccctgcagc tacttggtga cttaacaact ccaggagccc tgtcagctgc cctcctccac
     2281 ctaaacccct tcgactcttc tgctttgaca aagaaaatga cattggggag gggaggtgct
     2341 ccgcctccca gcttttctca aaatagtcct atagatactg gtaatctgga aatgaagaag
     2401 taattctgtc tctgcaccta cttttgcaga atgttcaagg aagtattctg tgttagtatt
     2461 aatgccaaaa agttgttttt aaaggttttg tactcagcac atcatacaaa ccacattact
     2521 tctgtcactt cagggcatcg ggactggctg gcgcccttgt tatgtgctat tttaatcagt
     2581 gtaacattgg tcaagttgtt acccatgtat gctgtgttta tcatgtgtat atcgtccaga
     2641 aagtattaag gctttaggta gatgcaactg gcgaaccttg gagagggaat gctgattgtc
     2701 ttgaccaaac ccacagcctg tctcttctct tgtttagtta cttacggcaa taaatcatct
     2761 atgagttaaa aaaaaaaaaa aaaaaaa
//