LOCUS BC069139 1542 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) receptor 4, mRNA (cDNA clone
MGC:95423 IMAGE:7216998), complete cds.
ACCESSION BC069139
VERSION BC069139.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1542)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1542)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Anup Madan, University of Iowa
cDNA Library Preparation: Anup Madan, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Neurogenomics Research Lab,
200 B EMRB, University of Iowa, Iowa City, IA-52242
anup-madan@uiowa.edu
Jessica Fahey, Tim Nelson, Jae Goon Yoon and Anup Madan
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: Plate: Row: Column: 0.
FEATURES Location/Qualifiers
source 1..1542
/db_xref="H-InvDB:HIT000263311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:95423 IMAGE:7216998"
/tissue_type="Synthetic constructs"
/clone_lib="NIH_MGC_243"
/lab_host="TOP10"
/note="Vector: pCR Blunt II TOPO"
gene 1..1542
/gene="CCR4"
/gene_synonym="CC-CKR-4"
/gene_synonym="ChemR13"
/gene_synonym="CKR4"
/gene_synonym="CMKBR4"
/gene_synonym="HGCN:14099"
/gene_synonym="K5-5"
/gene_synonym="MGC88293"
/db_xref="GeneID:1233"
/db_xref="HGNC:HGNC:1605"
/db_xref="MIM:604836"
CDS 54..1136
/gene="CCR4"
/gene_synonym="CC-CKR-4"
/gene_synonym="ChemR13"
/gene_synonym="CKR4"
/gene_synonym="CMKBR4"
/gene_synonym="HGCN:14099"
/gene_synonym="K5-5"
/gene_synonym="MGC88293"
/codon_start=1
/product="chemokine (C-C motif) receptor 4"
/protein_id="AAH69139.1"
/db_xref="GeneID:1233"
/db_xref="HGNC:HGNC:1605"
/db_xref="MIM:604836"
/translation="MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPP
LYSLVFVFGLLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQ
WVFGLGLCKMISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLA
TWSVAVFASLPGFLFSTCYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIM
LFCYSMIIRTLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDC
TFERYLDYAIQATETLAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGL
LQIYSADTPSSSYTQSTMDHDLHDAL"
BASE COUNT 359 a 382 c 358 g 443 t
ORIGIN
1 agctgcttct ggttgggccc agacctgcct tgaggagcct gtagagttaa aaaatgaacc
61 ccacggatat agcagacacc accctcgatg aaagcatata cagcaattac tatctgtatg
121 aaagtatccc caagccttgc accaaagaag gcatcaaggc atttggggag ctcttcctgc
181 ccccactgta ttccttggtt tttgtatttg gtctgcttgg aaattctgtg gtggttctgg
241 tcctgttcaa atacaagcgg ctcaggtcca tgactgatgt gtacctgctc aaccttgcca
301 tctcggatct gctcttcgtg ttttccctcc ctttttgggg ctactatgca gcagaccagt
361 gggtttttgg gctaggtctg tgcaagatga tttcctggat gtacttggtg ggcttttaca
421 gtggcatatt ctttgtcatg ctcatgagca ttgatagata cctggcaatt gtgcacgcgg
481 tgttttcctt gagggcaagg accttgactt atggggtcat caccagtttg gctacatggt
541 cagtggctgt gttcgcctcc cttcctggct ttctgttcag cacttgttat actgagcgca
601 accataccta ctgcaaaacc aagtactctc tcaactccac gacgtggaag gttctcagct
661 ccctggaaat caacattctc ggattggtga tccccttagg gatcatgctg ttttgctact
721 ccatgatcat caggaccttg cagcattgta aaaatgagaa gaagaacaag gcggtgaaga
781 tgatctttgc cgtggtggtc ctcttccttg ggttctggac accttacaac atagtgctct
841 tcctagagac cctggtggag ctagaagtcc ttcaggactg cacctttgaa agatacttgg
901 actatgccat ccaggccaca gaaactctgg cttttgttca ctgctgcctt aatcccatca
961 tctacttttt tctgggggag aaatttcgca agtacatcct acagctcttc aaaacctgca
1021 ggggcctttt tgtgctctgc caatactgtg ggctcctcca aatttactct gctgacaccc
1081 ccagctcatc ttacacgcag tccaccatgg atcatgatct ccatgatgct ctgtagaaaa
1141 atgaaatggt gaaatgcaga gtcaatgaac tttccacatt cagagcttac ttaaaattgt
1201 attttagtaa gagattcctg agccagtgtc aggaggaagg cttacaccca cagtggaaag
1261 acagcttctc atcctgcagg cagctttttc tctcccacta gacaagtcca gcctggcaag
1321 ggttcacctg ggctgaggca tccttcctca caccaggctt gcctgcaggc atgagtcagt
1381 ctgatgagaa ctctgagcag tgcttgaatg aagttgtagg taatattgca aggcaaagac
1441 tattcccttc taacctgaac tgatgggttt ctccagaggg aattgcagag tactggctga
1501 tggagtaaat cgctaccttt tgctgtggca aatgggccct ct
//