LOCUS BC069134 1323 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens paired box 1, mRNA (cDNA clone MGC:95415
IMAGE:7216990), complete cds.
ACCESSION BC069134
VERSION BC069134.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1323)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1323)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Anup Madan, University of Iowa
cDNA Library Preparation: Anup Madan, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Neurogenomics Research Lab,
200 B EMRB, University of Iowa, Iowa City, IA-52242
anup-madan@uiowa.edu
Jessica Fahey, Tim Nelson, Jae Goon Yoon and Anup Madan
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBT Plate: 1 Row: b Column: 8.
FEATURES Location/Qualifiers
source 1..1323
/db_xref="H-InvDB:HIT000263306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:95415 IMAGE:7216990"
/tissue_type="Synthetic constructs"
/clone_lib="NIH_MGC_243"
/lab_host="TOP10"
/note="Vector: pCR Blunt II TOPO"
gene 1..1323
/gene="PAX1"
/gene_synonym="HUP48"
/db_xref="GeneID:5075"
/db_xref="HGNC:HGNC:8615"
/db_xref="MIM:167411"
CDS 1..1323
/gene="PAX1"
/gene_synonym="HUP48"
/codon_start=1
/product="paired box 1"
/protein_id="AAH69134.1"
/db_xref="GeneID:5075"
/db_xref="HGNC:HGNC:8615"
/db_xref="MIM:167411"
/translation="MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISR
QLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEI
RDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPSQPTLPYNHIYQY
PYPSPVSPTGAKMGSHPGVPGTAGHVSIPRSWPSAHSVSNILGIRTFMEQTGALAGSE
GTAYSPKMEDWAGVNRTAFPATPAVNGLEKPALEADIKYTQSASTLSAVGGFLPACAY
PASNQHGVYSAPGGGYLAPGPPWPPAQGPPLAPPGAGVAVHGGELAAAMTFKHPSREG
SLPAPAARPRTPSVAYTDCPSRPRPPRGSSPRTRARRERQADPGAQVCAAAPAIGTGR
IGGLAEEEASAGPRGARPASPQAQPCLWPDPPHFLYWSGFLGFSELGF"
BASE COUNT 233 a 487 c 407 g 196 t
ORIGIN
1 atggagcaga cgtatggcga ggtgaaccag ctgggcggtg tgttcgtcaa cggccgcccc
61 ctgcccaacg ccatccgctt gcgcattgtg gagctggcgc agctgggcat ccgaccctgt
121 gacatcagtc ggcagctccg cgtatcccac ggctgcgtga gcaagatcct ggcgcgctac
181 aacgagaccg gctccattct gcccggggcc atcgggggga gcaagccccg cgtcaccact
241 cccaacgtgg tcaagcacat ccgggactac aagcaaggag accctggcat ctttgcctgg
301 gagatccgcg accggctgct ggccgacggc gtctgtgaca agtacaatgt gccttcggtg
361 agctccatca gccgcatcct gcgcaacaag atcggcagcc tggcgcagcc cggaccgtac
421 gaggcaagta agcagccgcc gtcgcagcct acgctgccct acaaccacat ctaccagtac
481 ccctacccca gtcccgtgtc gcccacgggc gccaagatgg gcagccaccc cggggtcccg
541 ggcacggcgg gccacgtcag catcccgcgc tcatggccct cggcacactc ggtcagcaac
601 atcctgggca tccggacgtt tatggagcaa acaggggccc tggctgggag cgaaggcacc
661 gcttactctc ccaagatgga agactgggcc ggcgtgaacc gcacggcctt ccccgccacc
721 cccgcagtga atgggctaga gaaacctgcc ttagaggcag acattaaata cactcagtcg
781 gcctccaccc tctctgccgt gggcggcttt ctccccgcct gcgcctaccc ggcctccaac
841 cagcacggcg tgtacagcgc cccgggcggc ggctacctcg ccccgggccc gccgtggccg
901 cctgcgcaag gtcctcctct ggcgcccccc ggggccggcg tagctgtgca tggcggggaa
961 ctcgcggcag caatgacctt caagcatccc agccgagaag gaagcctccc agctccggca
1021 gcaaggcccc ggacgccctc agtagcttac acggactgcc catcccggcc tcgacctcct
1081 aggggcagct ctccccggac ccgagcccgg agggaacggc aggcggaccc gggcgcacag
1141 gtctgcgcgg cggccccggc aatcggcacg ggcaggatcg gaggactcgc ggaggaggaa
1201 gccagtgccg gcccgcgggg tgcacgccca gccagccccc aggcccagcc ctgcctctgg
1261 ccggacccac cacacttcct ttattggtct gggtttttag gcttctctga acttgggttt
1321 tag
//