LOCUS BC069057 5512 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, MYM-type 3, mRNA (cDNA clone MGC:75100
IMAGE:5499547), complete cds.
ACCESSION BC069057
VERSION BC069057.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5512)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5512)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42475939.
FEATURES Location/Qualifiers
source 1..5512
/db_xref="H-InvDB:HIT000263231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75100 IMAGE:5499547"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5512
/gene="ZMYM3"
/gene_synonym="DXS6673E"
/gene_synonym="KIAA0385"
/gene_synonym="MYM"
/gene_synonym="XFIM"
/gene_synonym="ZNF198L2"
/db_xref="GeneID:9203"
/db_xref="HGNC:HGNC:13054"
/db_xref="MIM:300061"
CDS 93..4205
/gene="ZMYM3"
/gene_synonym="DXS6673E"
/gene_synonym="KIAA0385"
/gene_synonym="MYM"
/gene_synonym="XFIM"
/gene_synonym="ZNF198L2"
/codon_start=1
/product="zinc finger, MYM-type 3"
/protein_id="AAH69057.1"
/db_xref="GeneID:9203"
/db_xref="HGNC:HGNC:13054"
/db_xref="MIM:300061"
/translation="MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRG
WAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGT
LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE
ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAH
PSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPND
EDFVPFRPRRSPRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLF
CSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQ
QQRPIPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNC
CDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGAYKKKNTRVYPCVWCKTLCKNF
EMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTV
YQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSGKPEVLDWQDQVFQFCCRDCCEDFK
RLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLGLCCITCTYC
SQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQGKLLETIHWRGQIR
HFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEE
NGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQ
TEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKIVE
TIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFG
PARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLVGPEDVSTEQD
LPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYANGETSKGD
ELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYL
LENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYS
PFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVR
QRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL
QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD"
BASE COUNT 1256 a 1571 c 1431 g 1254 t
ORIGIN
1 ggggatcacg ggtagagtgg gctccaggag gtagggcgag cagggtgtga cgggggccag
61 actcttgagc cagtacatat ccagccatac tcatggaccc cagtgatttc cccagtccat
121 ttgacccatt gaccctgcca gagaagcccc tggctggaga cctaccagta gacatggaat
181 ttggagagga tctactggaa tcccagactg ccccaactcg aggatgggcc ccccctggcc
241 cttctccatc ctcgggagcc ctggacctgc ttgatacccc tgctggcctg gaaaaagacc
301 ctggagtcct ggatggagcc actgagttgc tggggctggg ggggctgctc tataaagccc
361 cctctccccc ggaggtggac cacggtcctg agggaaccct ggcatgggat gcaggagatc
421 agaccctaga gcctggacca gggggccaga cccctgaggt ggtaccacct gatccagggg
481 ctggggcaaa ttcctgttca cctgaggggc tactagagcc tttggctcca gattctccaa
541 taacactgca gtccccacat attgaagagg aggagaccac ctccatagct actgcaagaa
601 ggggctcccc tgggcaggag gaggagcttc cccaagggca gccacagagc ccaaatgccc
661 cgcctagccc ttcagtggga gagactctgg gggatggaat caacagttct cagaccaaac
721 ctgggggctc tagcccccct gcacatcctt ccttgccagg agatggcctg actgcgaagg
781 cgagtgagaa gccgcctgaa cggaagagaa gcgagcgcgt taggagagca gaacctccaa
841 aacctgaggt tgtagattcc actgagagca ttccagtgtc agatgaggat tctgatgcca
901 tggtagatga ccccaatgat gaggactttg tgccattccg gccccggcgc tctcctcgca
961 tgtccctacg ctcaagtgtg tcacaaaggg ccgggcgctc tgcagtgggc accaagatga
1021 cttgtgcaca ttgccggaca ccactgcaga aggggcagac tgcctatcag cgcaaggggc
1081 tgcctcagct cttctgctcg tcatcctgcc tcaccacttt ctccaagaag ccctcgggca
1141 aaaagacctg taccttctgc aagaaggaga tctggaacac caaggactcg gttgtggcgc
1201 agactggttc tggaggctcc ttccatgagt tctgcacatc cgtctgtctc tccctgtatg
1261 aggcccagca gcagcgcccg atcccccagt ctggggatcc cgccgacgct actcgctgca
1321 gcatatgcca gaagactgga gaggtcctgc acgaggtcag caatggcagc gtggtacacc
1381 ggctctgcag cgattcttgc ttctccaaat tccgggccaa caagggactg aaaaccaact
1441 gttgtgacca gtgtggggct tacatctaca ccaagaccgg gagtcctggc cctgagctcc
1501 tcttccacga gggccaacaa aagcggttct gcaacacaac ctgcttgggg gcgtacaaga
1561 agaaaaacac acgtgtgtac ccatgtgtct ggtgcaagac cctgtgtaag aactttgaga
1621 tgctatcaca tgtggatcgt aatggcaaga ccagcttgtt ctgttccctg tgctgtacca
1681 cttcttacaa agtgaagcag gcagggctca ctggccctcc ccgaccctgc agcttctgcc
1741 gccgcagcct ctctgacccc tgttactaca acaaggttga ccgcacagtc taccagttct
1801 gcagccccag ctgctggacc aagttccagc gcacaagccc tgaggggggc attcacctga
1861 gctgtcacta ctgtcacagc ctcttcagtg gcaagcctga ggtcttggac tggcaggacc
1921 aagtgttcca gttctgctgc cgtgattgct gtgaggactt caagcggctt cggggtgtgg
1981 tgtcccagtg tgagcactgt cggcaggaga aactcttgca tgagaaactc cgattcagcg
2041 gagtggagaa aagcttctgc agcgaaggct gtgtgctgct gtacaaacag gacttcacta
2101 agaagctggg cttgtgctgt atcacttgta cttactgctc ccagacctgc cagcgcggag
2161 tcaccgagca actggatggc agcacctggg acttctgcag tgaggactgt aagagcaagt
2221 acctgctgtg gtactgcaag gctgcccggt gccatgcgtg taagcgccag gggaagctgc
2281 tggagaccat ccactggcgt gggcagatcc gtcatttctg caaccagcag tgtcttctgc
2341 gtttctatag ccagcagaac caacccaacc tggataccca gagtgggccc gagagcctcc
2401 tgaacagtca gtctcctgag tcaaaacccc agacaccctc tcaaaccaaa gtggagaaca
2461 gcaacacagt gaggacccca gaggaaaatg ggaatttggg caagatccct gtgaagaccc
2521 gatcagctcc cactgctccc acccctccac ccccaccacc cccagcaaca ccccgcaaaa
2581 acaaggctgc catgtgtaag ccactgatgc agaatcgggg cgtctcctgc aaggtggaga
2641 tgaagtccaa aggaagtcaa acagaagagt ggaagccaca ggtgatcgtg ctgcccatcc
2701 cagtgcccat cttcgtgcca gtgcctatgc atctgtactg ccagaaagtc ccggtgcctt
2761 tctcgatgcc tatcccggtg cctgtgccca tgttcttgcc cactaccttg gagagcacag
2821 acaagattgt agagaccatt gaggagctga aggtgaagat cccttccaac cccttggagg
2881 ccgacatcct ggctatggca gaaatgattg cagaggctga ggagttagac aaggcctcat
2941 ctgacctttg tgatcttgtg agcaaccaga gtgcagaggg actcctggaa gactgtgacc
3001 tgtttgggcc tgctcgagat gatgtcctgg ccatggcagt caagatggcc aatgtcttgg
3061 atgagcctgg gcaagacttg gaggcagact tccctaagaa tcctctggac attaatccca
3121 gtgtagactt cctctttgat tgtggcctgg tagggcctga ggatgtgtct actgaacaag
3181 accttccccg aaccatgagg aagggtcaaa agcggctggt gctttccgaa agctgctccc
3241 gggactccat gagcagtcag cctagttgta ccgggctcaa ctattcatat ggtgtcaatg
3301 cttggaagtg ctgggtgcag tcaaaatatg ccaatggaga aaccagcaag ggtgatgagc
3361 tgcgctttgg ccccaaaccc atgcgtatca aagaggatat tctcgcctgc tcagctgctg
3421 agctcaacta cggtctggcc cagtttgtga gagaaatcac tcggcccaat ggtgaacgat
3481 atgaacctga cagtatctac tatttgtgtc ttggcatcca gcagtacttg ctggaaaata
3541 accggatggt gaacattttc acggaccttt actacctgac ttttgttcaa gaactcaaca
3601 agtctctgag tacctggcag cccacactcc tccccaacaa tacggtgttc tctcgagtgg
3661 aggaggagca cctctgggag tgtaagcaac tgggggtcta ctcgcccttt gtcctcctca
3721 acaccctcat gttcttcaac actaagtttt ttgggctgca gacggctgag gaacacatgc
3781 aactctcctt caccaatgtg gtgcggcagt cccgcaagtg taccacccct cggggcacca
3841 ccaaggtggt gagcatccgc tactatgccc cagtccgcca gaggaaaggg cgagacacgg
3901 gtcctggaaa acggaagaga gaagatgaag cccctatctt agagcagcgt gagaaccgca
3961 tgaatcccct ccgctgccct gtcaagttct atgaattcta tctctcaaaa tgtcctgaaa
4021 gcctccggac tcgcaacgat gtgttctacc tgcaacctga acggtcctgc atcgccgagt
4081 cacctctctg gtattctgtg atccccatgg accgcagcat gttggagagc atgctcaatc
4141 gcatcctggc tgtgcgcgag atttatgagg aactgggtcg tcctggggag gaagacctgg
4201 actgagctcg tgtgccatcc atatccatct ttcacatcaa tgtctgtcct gtggccatgt
4261 ccctcagggt gacaggccca ggaaccaatg ctactcattc tgaagggccc tgactgctcc
4321 tttccgctca cccattccct gccttctcta ggaaccctgg cttttatctt cttccgtacc
4381 acttgacaac catggggccc tggtcttctg tactcagggg ctggtctccc agtgatgggc
4441 aaaagccagc ttgcccgttt tctttatgct tcagagtaaa cccctccttc tgggtccaga
4501 ctctgggtgg agtgttaata gctctggtga tcctgttggc tttgggtttc ctgacccatc
4561 ccgcataggt agagcctctt gttcctaggc atgacctagg gaaaaaccca gctgccttct
4621 ctgccctgtg cccactccct tctctactct tccccagcac catgccaaaa ggtcttatct
4681 gaaaggtaag aaataaacaa tgaaagcgat gaggggacca tttacataaa acacagagct
4741 tagacactct tcccctccta tgaaataatt ggttgttggc accatctcac caccgcatat
4801 ccctcacccc ctcggcaagc accaatcctt ggtgctgccg tttttaaaat cttccaaatg
4861 cctttttttc ctcagaggca gagaatgact aagtacgggg agcagactcc tgttgtgcag
4921 actcctgtcc ccttggtttc tgtgtttgtc tctctgccat cttaggttgc catgagccat
4981 ggtgtcaaca tgcttagccc cctctgtaac tgcctccctt tagttcaatg gacagacctc
5041 ccaaggcaaa aactaccttc tgacttgggt tgaggctggg ttcccctcta ttgttcccct
5101 atcataagag ctaggccaag cctatgggac cttgagtcat gcaggatggg atctgtggtc
5161 aaaggacagg cgaggagctg tgggcgcagg gcctgccgcc actgcctaca tcttctctct
5221 tccccatctt gcattggagg tcccagaaaa caattagctt ctggcaaagg gggtacccac
5281 ttctttccct gttgactttg ctgtttccca ggctcctttt tgtgttttta taactgtcac
5341 cagttagcca ctgtttaaat tgtatatatt gttctgaggc gcctggcctg tcccttcagt
5401 gagccatgcc cacccttgtg ttgtagtgag aagctgttgt cacgactaac cttctgtctc
5461 tgaaattgtt tgtttcaaat aaagagttaa aattgtaaaa aaaaaaaaaa aa
//