LOCUS BC069048 2007 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens anaphase promoting complex subunit 1 pseudogene, mRNA
(cDNA clone IMAGE:4111322), complete cds.
ACCESSION BC069048
VERSION BC069048.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2007)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2007)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60460917
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2007
/db_xref="H-InvDB:HIT000263223"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4111322"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2007
/gene="LOC285074"
/db_xref="GeneID:285074"
CDS 136..432
/gene="LOC285074"
/codon_start=1
/product="anaphase promoting complex subunit 1 pseudogene"
/protein_id="AAH69048.1"
/db_xref="GeneID:285074"
/translation="MDQCVTVERELEKVLHKFSGYGQLCERGLEELIDYTGGLKHEIL
QSHGQDAELSGTLSLVLTQCCKRIKDTVQKLASDHKDIHSSVSRVGKAIDKDSL"
BASE COUNT 535 a 478 c 524 g 470 t
ORIGIN
1 ggcggccgag gcggcgggcg cactagccgc ggcgcccgct tggggaacga ggagcaggac
61 gcggcctcgg cggggcccgg gccgaacggc tgcggacacc tgggcgccga ggagccgagc
121 gccgccgcct ccggcatgga tcagtgcgtg acggtggagc gcgagctgga gaaggtgctg
181 cacaagttct cgggctacgg gcagctgtgc gagcgcggcc tggaggagct catcgactac
241 accggcggtc tcaagcacga gatcctgcag agccacggcc aagatgctga attatcaggg
301 acactttcac ttgttttgac acagtgctgt aaaagaataa aggatactgt tcaaaaattg
361 gcctccgacc acaaagacat ccacagcagt gtttctcggg ttggaaaagc cattgataag
421 gattcacttt aagagatttg gaaactcttc cctttggaat tgctcttccc atcagagatg
481 caatttatca ctgtcgtgaa cagcctgcct cagactggcc agaagctgtc tgtctcttga
541 ttggacgtca ggatctttcc aagcaggcct gcgaaggaaa cttacccaaa gggaagtctg
601 tgctctcatc agatgttcct tcaggaacag aaactgagga ggaagatgac ggcatgaatg
661 acatgaatca cgaggtcatg tcattaatat ggagtgaaga tttaagggtg caggatgtgc
721 gaaggcttct tcagagtgcg catcctgtcc gtgtcaatgt agtgcagtac ccagagctca
781 gtgaccacga gttcattgag gaaaaggaaa acagattgct ccaattgtgt cagcgaacta
841 tggctcttcc tgtaggacga ggaatgttta ccttgttttc gtaccatcct gttccaacag
901 agccattgcc tattcctaaa ttgaatctga ctgggcgtgc ccctcctcgg aacacaacag
961 tagaccttaa tagtggaaac atcgatgtgc ctcccaacat gacaagctgg gccagctttc
1021 ataatggtgt ggctgctggc ctgaagatag ctcctgcctc ccagatcgac tcagcttgga
1081 ttgtttacaa taagcccaag catgctgagt tggccaatga gtatgctggc tttctcatgg
1141 ctctgggttt gaatgggcac cttaccaagc tggcgactct caatatccat gactacttga
1201 ccaagggcca tgaaatgaca agcattggac tgctacttgg tgtttctgct gcaaaactag
1261 gcaccatgga tatgtctatt actcggcttc ttagcattcg cattcctgct ctcttacccc
1321 caacgtccac agagctggat gttcctcaca atgtccaagt ggctgcagtg gttggcattg
1381 gccttgtata tcaagggaca gctcacagac atactgcaga agtcctgttg gctgagatag
1441 gacggcctcc tggtcctgaa atggaatact gcactgacag aaagtcatac tccttagctg
1501 ctggcttggc cctgggcatg gtctgcttgg ggcatggcag caatttgata ggtatgtctg
1561 atctcaatgt gcctgagcag ctctatcagt acatggttgg aggacatagg cgctttcaaa
1621 caggaatgca tagggagaaa cataaatcac caagttatca aatcaaagaa ggagatacca
1681 taaatgtgga tgtgacttgt ccaggtgcta ctctagcttt ggctatgatc tacttaaaaa
1741 ccaataacag tgtcttctag gaagcccaga cacatggaga agttctgagt gttttggccg
1801 atagtcccag atgaggttcc agcaacagct gggatcaccc atgagatgtg agtgaggaag
1861 gctttgagat ggtttcagcc ctagccacca ctgacctcat aagagaccac aagaatgaga
1921 atcacctggc caagcccagc agaccttcag aattcagaaa taaaataatt catcttattt
1981 taaaaaaaaa aaaaaaaaaa aaaaaaa
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