LOCUS       BC069033                1912 bp    mRNA    linear   HUM 26-JUN-2007
DEFINITION  Homo sapiens piggyBac transposable element derived 1, mRNA (cDNA
            clone IMAGE:6286015), partial cds.
ACCESSION   BC069033
VERSION     BC069033.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1912)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CGAP (Stanford)
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 54 Row: k Column: 20
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 25777740.
FEATURES             Location/Qualifiers
     source          1..1912
                     /db_xref="H-InvDB:HIT000263216"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6286015"
                     /tissue_type="Liver, hepatocellular carcinoma"
                     /clone_lib="NIH_MGC_100"
                     /lab_host="DH10B"
                     /note="Vector: pOTB7"
     gene            1..>1912
                     /gene="PGBD1"
                     /gene_synonym="dJ874C20.4"
                     /gene_synonym="HUCEP-4"
                     /gene_synonym="SCAND4"
                     /db_xref="GeneID:84547"
                     /db_xref="HGNC:HGNC:19398"
     CDS             267..>1912
                     /gene="PGBD1"
                     /gene_synonym="dJ874C20.4"
                     /gene_synonym="HUCEP-4"
                     /gene_synonym="SCAND4"
                     /codon_start=1
                     /product="PGBD1 protein"
                     /protein_id="AAH69033.1"
                     /db_xref="GeneID:84547"
                     /db_xref="HGNC:HGNC:19398"
                     /translation="MYEALPGPAPENEDGLVKVKEEDPTWEQVCNSQEGSSHTQEICR
                     LRFRHFCYQEAHGPQEALAQLRELCHQWLRPEMHTKEQIMELLVLEQFLTILPKELQP
                     CVKTYPLESGEEAVTVLENLETGSGDTGQQASVYIQGQDMHPMVAEYQGVSLECQSLQ
                     LLPGITTLKCEPPQRPQGNPQEVSGPVPHGSAHLQEKNPRDKAVVPVFNPVRSQTLVK
                     TEEETAQAVAAEKWSHLSLTRRNLCGNSAQETVMSLSPMTEEIVTKDRLFKAKQETSE
                     EMEQSGEASGKPNRECAPQIPCSTPIATERTVAHLNTLKDRHPGDLWARMHISSLEYA
                     AGDITRKGRKKDKARVSELLQGLSFSGDSDVEKDNEPEIQPAQKKLKVSCFPEKSWTK
                     RDIKPNFPSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSL
                     EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFA
                     DNGHLDQKDKFTKLRPLIKQMNKNFLLYAPLEKKKKKKKK"
BASE COUNT          579 a          424 c          471 g          438 t
ORIGIN      
        1 ctacgtcttt gttgtgcgcg ttcctgaact tttggtccat taaccaacaa ttagacacgc
       61 cggtattcag tgcctggcgc ggtgctagat gctgggtgta atctcagaaa aatacattca
      121 ggggcgcgcc tgagggtgct ggctgctggc atctcaggtg ctttacgtgc attcgtgaag
      181 aagcccatca gtatttcttg aataccagat ctctatttct gaatatagac cccaagctaa
      241 gtgaagcttt agcctctaag ctcaacatgt atgaagcttt gccaggccct gctcctgaaa
      301 atgaagatgg ccttgtgaaa gtgaaggagg aagatcccac ctgggagcag gtgtgcaact
      361 cacaggaggg cagctcccac actcaggaga tttgccgcct gcgctttcgg cacttctgct
      421 accaggaggc tcacggaccc caggaagctc tggcccaact ccgagaactt tgtcatcaat
      481 ggctgagacc ggagatgcac accaaggaac agataatgga actgctggtg ctggagcagt
      541 tcctgaccat cctgcccaag gagctccagc cctgtgtgaa gacatatcct ctggagagtg
      601 gagaggaggc agtgacagtg ctggagaatc tagagacagg aagtggagac acaggacaac
      661 aggcctctgt ctatattcag ggacaggaca tgcacccaat ggtggcagaa tatcaaggag
      721 tctctttgga gtgtcagagc ctccagctcc tgcctgggat aaccaccctg aagtgtgaac
      781 ctccacagcg tcctcaaggg aacccccaag aagtgagtgg gcctgttccc cacggatcag
      841 ctcatctcca ggaaaaaaac cccagagaca aggctgtagt gcctgtgttt aacccagtca
      901 ggtcccagac attggtgaag actgaggaag aaacagccca ggccgttgct gcagagaagt
      961 ggtcacatct gagtctgact cggaggaacc tctgtgggaa ctcagctcag gagacagtta
     1021 tgagcctcag tccgatgact gaagaaattg taactaaaga tagattgttt aaagcaaagc
     1081 aagaaacttc tgaagaaatg gaacaaagtg gagaagcctc aggaaagccc aacagagagt
     1141 gtgcacccca gattccttgt agtactccta ttgctactga aaggacagtt gcacatttga
     1201 acactctgaa ggaccgtcac ccaggtgatt tgtgggcccg catgcacatc tcatccctgg
     1261 aatatgctgc aggagacatt acccgaaaag ggagaaaaaa agacaaagct cgagtgagtg
     1321 aactgctcca aggcctctca ttctctggtg actcagatgt ggaaaaagat aatgagcctg
     1381 agatccagcc tgctcaaaag aagttaaagg tatcatgttt cccagaaaag agttggacca
     1441 aaagagacat taaacccaat tttccaagct ggtcagcact ggattctgga cttttgaatc
     1501 tcaagagcga aaagttgaac ccagtagagc tttttgaatt attttttgat gatgaaacat
     1561 tcaacttaat tgtcaatgaa accaataatt atgcttctca gaaaaatgtc agcttggaag
     1621 tcacagttca ggaaatgagg tgtgtgtttg gtgtcttact tttgagtgga tttatgaggc
     1681 atcctagaag ggaaatgtat tgggaagtct ctgacaccga tcagaacctg gttagagatg
     1741 caatcagaag ggacagattt gaattgattt tctcaaacct gcactttgca gataatggcc
     1801 acctagatca aaaagataag tttacaaagt tgagacctct cataaaacaa atgaataaaa
     1861 atttcctctt gtatgctccc ctggaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//