LOCUS BC069026 1812 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens Sp5 transcription factor, mRNA (cDNA clone IMAGE:6267944), with apparent retained intron. ACCESSION BC069026 VERSION BC069026.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1812) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1812) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: j Column: 10 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1812 /db_xref="H-InvDB:HIT000263209" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6267944" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" BASE COUNT 344 a 625 c 539 g 304 t ORIGIN 1 agctaacctt ttgtctcttc tccgccctcc ctcgccgcct atgcaggacc gcacccccag 61 cgcctccccg gacctgggca agcactcgcc cctggcattg ctggccgcca cctgtagccg 121 catcggccag ccgggcgcgg cggcgccccc ggacttcctg caggtgccct acgaccccgc 181 gctgggctca ccctccaggc tcttccaccc gtggaccgcc gacatgccgg cgcactcgcc 241 aggcgcactg ccgcccccgc atcccagctt ggggctgacg ccgcagaaga cgcacctgca 301 gccgtccttc ggggctgcgc acgagcttcc ccttacaccc cccgccgacc cctcgtaccc 361 ctacgagttc tcgccggtca agatgctgcc ctcgagcatg gcggctctgc ccgccagctg 421 cgcgcccgcc tacgtgccct acgcggcgca ggccgcgctg ccgccaggct actccaacct 481 gctgcctccg ccgccgccac cgcccccgcc gcccacctgc cgccagttgt cacccaaccc 541 ggcccccgac gacctcccgt ggtggagcat cccgcaggcg ggcgccgggc cgggggcctc 601 cggggttccg ggaagcggcc tctccggcgc ctgtgccggg gccccccacg cgccccgctt 661 ccccgcctct gcggccgctg ctgctgcggc cgccgccgcc ctacaaagag gcctggtgtt 721 gggcccgtcg gactttgcgc agtaccagag ccagatcgcc gcgctgctgc agaccaaggc 781 ccccctggcg gccacggcca ggaggtgccg ccgctgccgc tgtcccaact gccaggcggc 841 gggcggcgcc cccgaggcgg agccggggaa gaagaagcag cacgtgtgcc acgtgccggg 901 ctgcggcaag gtgtacggga agacgtcgca cctgaaggcg cacctgcgct ggcacacggg 961 cgagcgaccc ttcgtgtgca actggctctt ctgcgggaag agcttcacgc gctcggacga 1021 gctgcagcgg cacctgcgga ctcacacggg cgagaagcgc tttgcctgtc ccgagtgcgg 1081 caagcgcttc atgcgcagcg accacctcgc gaagcacgtc aagactcacc agaataagaa 1141 gctcaaagtc gctgaggccg gggttaagcg ggaggacgcg cgggacctgt gagccctccc 1201 ggaggtggac ccccttccca gcacctctgc gagagatccg gggacctgtg ggcagctggc 1261 ggaggggaga ctcagcagac ggaccctctc cgttgcctgc ctcccaaaat ggagccaggc 1321 ttccaacttc cgctgccttc ggacataggg acccagttcc caggagcggg gaggtagggt 1381 tggggctggg gcatttggat tgtaattggg agctctgccg tacgccaggg cggttccaaa 1441 ctctaaaccg ttcccaccgt cagggagacc tacagtttcg ggggaccacc ctggtctggc 1501 cttgtatata ggaaatgctg ctgaactgaa tagaaaggaa cttgggagat ttgaaacagt 1561 gctcgggttt tcgctaggac cggtttgggc tttgtacagg ttatttaata gctttgttaa 1621 agataattat aataattata acattaataa aaatgttgct tttgtcttca gctccatgca 1681 gagctacagc atgatatgtc tctgtaaagt gatcagcagt tgcagcgtga aaataaatac 1741 tttaactcag gggtcactac aggaagaccc cgttgaaaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaaaaaaa aa //