LOCUS BC068577 2355 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens chromosome 11 open reading frame 87, mRNA (cDNA clone MGC:87557 IMAGE:4818568), complete cds. ACCESSION BC068577 VERSION BC068577.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2355) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2355) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: d Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46559746. FEATURES Location/Qualifiers source 1..2355 /db_xref="H-InvDB:HIT000263133" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87557 IMAGE:4818568" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2355 /gene="C11orf87" /gene_synonym="LOH11CR1A" /db_xref="GeneID:399947" /db_xref="HGNC:HGNC:33788" CDS 377..970 /gene="C11orf87" /gene_synonym="LOH11CR1A" /codon_start=1 /product="chromosome 11 open reading frame 87" /protein_id="AAH68577.1" /db_xref="GeneID:399947" /db_xref="HGNC:HGNC:33788" /translation="MSARAPKELRLALPPCLLNRTFASPNASGSGNTGARGPGAVGSG TCITQVGQQLFQSFSSTLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYE RDHCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQG PCAPPPPPPASSPQGAHAASSCLDTAGEGLLQTVVLS" BASE COUNT 508 a 664 c 548 g 635 t ORIGIN 1 tgggcggcgg cggcagcagc gcggctcggt ctctggtcca ttcactccac gctttctgca 61 gccgccactg cagccgcgcg gcgggggctc cctccttgca gccagccggc ggtccagcct 121 ggtgcctctg caaaggaaag gggagcgtgg agacgtgttc gaggtggtat cggcgaggat 181 ctctcgggcg ccgctcactc cttggtcgcc ttgcttgcca gcagttgctc ccttagtcct 241 tggctcgctc gcacaccccc tcccgctaca gggagcagtt ttgggtggcg tgggctccgt 301 cctcttcttg gctggtagga acggtgtgcc caagagggga agcctagtgg gcctggcccc 361 tcccagcccc gcgccaatga gtgccagggc gccgaaggag ctgaggctgg cgttgccgcc 421 gtgtctcctc aaccggacct ttgcttcccc caacgccagc ggcagcggca acacgggtgc 481 ccgcggccca ggcgcagtag gcagcggcac ctgcatcacg caggtgggac agcagctctt 541 ccagtccttc tcctccacgc tggtgctgat tgtcctggtt accgtcatct tctgcctcat 601 cgtgctgtcc ctctccactt tccacatcca caagcgtagg atgaagaagc ggaagatgca 661 gagggctcag gaggaatatg agcgggatca ctgcagcggc agccgcggtg gcggggggct 721 gccccgacct ggcaggcagg ccccaaccca cgcaaaggaa acccggctgg agaggcagcc 781 ccgggactct cccttctgcg ccccttccaa cgcctcgtcg ttgtcctctt cgtcccctgg 841 cctcccgtgc cagggtccct gtgctcctcc gcctccaccg ccagcctcca gtccccaagg 901 agcacacgca gcttcctcct gtttggacac agctggcgag ggccttttgc aaacggtggt 961 actgtcctga tcgtctagcc cctctcgttc cccgtcctcg tttccagcat ctttgccacc 1021 cttgcttttt tccttcttcc ttccttttcc attttcctct ggcccctctt tcctcttcct 1081 ggtttcctta cctgccctcc ccttactctt gtttctcctc cgccgaggca ctgtgcggta 1141 tttgtaaata ttgggcgagg aaagtctcgg aagaagaaat aacgctgata ataatacttt 1201 attaatattt atagtaatta ttataatact aataacacaa tccaagcgca tgacaaatca 1261 cataatttct aactgtcaat ggaggatgca tcttcccttt ccaccccgcg ctcacctcaa 1321 ttaggaggag aaaccgcaca agctaccaaa tatataaaag gcattgattc ccggagcaaa 1381 gggaggggag ggggcccggt aatgtacata gctgtcaagt taagatttag tttccttcct 1441 tcccctctga cccctaagct ttcacttttc ctttagcttc cctttcctcc ccattcccac 1501 cctcagccgg gctcaggcaa tagtatatta taaagaaaat gtctacatta agcaccagga 1561 ctgcaagagg ccatagagaa tagtccccgg aaagtgttta tgacaggtac ccctcgccag 1621 tcggcccatt tctcaccctt tggttaacca ttacattttc caggacagag catttaattt 1681 actttttaaa atgaccctcg ctggccgagc ataagtacgt taaaatcttt aaatgagttt 1741 tttttaaaaa gctaacgctt tcattccctg ccccgccccc acccgtacac ctttgacttg 1801 tgacattttc aggatttaca aaggatctgg gagctgtcca gccaggtctg gtgctgaagt 1861 cgcctcaccg ttctgattac ttcctctagt tgtgaaggca gaggaggggc tgttttggaa 1921 agtgactatt ctggcttttg gttgggttct ttcttctttt tctacaatcg agttagcgtg 1981 tactattggt tttcttatta ttaaacattg cataagttac cttttttgta aaaaaaaaaa 2041 agtattaggt gatgtgcagt actgaaagtg cagtatctaa ccaactagaa cgtttgtttt 2101 atttttagaa caagtgcacc tttgttatat atttagtata ttggtaccaa atacagaaaa 2161 aaactatagt tctgtactat gtcctccaaa ctgtatatta ttgttcttaa tttccagctg 2221 ttgatataat ggttaccact ggatgagaaa ttcagtggtg cagacctggc ttctgctgtt 2281 tccagaagtg ttcttttgta ccttattctg tagtagactg ttataaaaag atgacacaca 2341 aaaaaaaaaa aaaaa //