LOCUS BC068538 3554 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens phosphatidylinositol transfer protein, alpha, mRNA (cDNA clone IMAGE:4818885), partial cds. ACCESSION BC068538 VERSION BC068538.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3554) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3554) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: e Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377785. FEATURES Location/Qualifiers source 1..3554 /db_xref="H-InvDB:HIT000263095" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4818885" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene <1..3554 /gene="PITPNA" /gene_synonym="VIB1A" /db_xref="GeneID:5306" /db_xref="MIM:600174" CDS <1..952 /gene="PITPNA" /gene_synonym="VIB1A" /codon_start=2 /product="PITPNA protein" /protein_id="AAH68538.1" /db_xref="GeneID:5306" /db_xref="MIM:600174" /translation="PQRRPAPARRCGTGAPGGVGSGARGDEARAAGAGAATAARAAGT EQSTTKTHSRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQ YTHKIYHLQSKVPTFVRMLAPEGALNIHEKSWNAYPYCRTVITNEYMKEDFLIKIETW HKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGP LGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFC WLDKWVDLTMDDIRRMEEETKRQLGEMRQKDPVKGMTADD" BASE COUNT 897 a 879 c 887 g 891 t ORIGIN 1 gccgcagaga cgccccgccc ccgcgcggcg ctgcggaacc ggagctccgg gcggcgtcgg 61 cagcggcgcg agaggcgacg aggcccgggc ggcaggagcc ggcgcggcga ccgcggcgag 121 ggcggcgggg acggagcaga gcacgacgaa gacgcacagt cgagtaatcc tgcctgtgtc 181 tgtagatgag tatcaagtgg ggcagctgta ttctgtggct gaggccagta aaaatgaaac 241 gggtggtggc gaaggcgtgg aggtcctggt gaatgagccc tacgagaagg acggtgagaa 301 aggccagtac acacacaaga tctaccacct gcagagcaaa gtacccacgt ttgttcgaat 361 gctggcccca gagggagccc tgaatataca cgagaaatcc tggaatgctt acccctactg 421 cagaaccgtt attacaaatg agtacatgaa agaagacttt ctgattaaaa ttgaaacctg 481 gcacaaacca gatcttggca cgcaggagaa tgtgcataag ctggagcccg aggcgtggaa 541 acacgtggaa gccgtatata tagacattgc agatcgaagc caagtgctca gcaaggatta 601 caaggcagag gaagacccag caaaatttaa atctatcaaa acaggccgag gacccttggg 661 ccccaattgg aagcaagagc ttgtaaacca gaaggactgc ccatatatgt gtgcatacaa 721 actggtgacc gtcaagttca agtggtgggg cctgcagaac aaagtggaga acttcatcca 781 taagcaagag aggcgtctgt ttacaaactt ccacaggcag ctgttctgtt ggctcgataa 841 gtgggttgac ctgaccatgg acgacattcg aaggatggaa gaagagacga agagacagct 901 gggtgaaatg agacaaaagg acccagtgaa aggaatgaca gcagatgact aaagccgcct 961 ttcccctctg cactttttgc aagacagtgg tcaacaggaa gacccagcag ctccaccctc 1021 ccaagtgaca ggccattttc ggacgcagca gttctgtgcc cattcttcag gcaactttcg 1081 attccttact gtagctaatt ctagatgccc ttcagtattg tgaacaaata gaccgtctgg 1141 tgtcacagag ccagcgtgtg caggagcctg ctcctccgag atacgtggcg tgtaggttgc 1201 tgtagttaca gcgcctccgt ctctctccat tgtgttccga tccatttctg tgtgttcccc 1261 caacctttat ttccaagtga cattttcagt ctttcaaata gctgcctttt gtgatgtggt 1321 gatttaaatg atttaagttc atttgttctc aaccttgggg taaactgagg tattttgctt 1381 cctgggaaga tcttcgcaat tttgagtgct cctgtgggga gcggggatga gctaaagata 1441 caatgtttcc ctgccccgca ccgcttccac aaaatagcaa tgtggttttg cagctctgac 1501 ttctgctccc agtaacccat cgttagggca ctctagcact atggaggtac ccaaggctca 1561 gccagtctct atttaagaaa atttaacaaa tacgagtaac cctgtcccaa tcactgaatc 1621 tctagttact actcttagaa acacctgtgg cttcttggcc ctcctgttgc ccgctctgaa 1681 tctctctgca gtctacaaaa tcgccccagt caactctcca cttggaggga attgtccagt 1741 gtggccccta gaattgagtc accccctaga taccaactgt ctgaccccga ggagctctgt 1801 aagtccctgc tcctcctctt ccctttgggg ctggtgctgc cactcagcaa taatcctctt 1861 ttctctgtgc tttcttaggt ccctgtcctc tgtctttgag gctggttagg aagcaagagt 1921 cctgatcttt catgctgcac aatatgagca tgcaaaaagc tttttccagc agaacatgtt 1981 ccctcgtctc cagttgccgg aaaggaattt ggggatcaag aacttagctc gtcctacccc 2041 catgttgagt tctgccctgg aaaacccaaa gcaagtagtg atcatagtac agaacccgac 2101 caaagtaggc tggtgaggaa gtccaggctc caggggaaca gacgctgccc agtgttcata 2161 gcttcctgca acttgacaga gcctgagttt gcctcttagt gggagaatga gagagagctg 2221 tagtgtcacc tgacattccc caaaccttgt gaagcacgtt ggcctaagtg tgccgtgatc 2281 ccagcccaca ctagcctggg tgcatctgct aatgggagac caaatctttg tccgggaagc 2341 aagaagtggg tgggagaatg tatcctgttt ttgtcagttt gtttgcctta ctcatttcta 2401 agtgcaataa gggagtgtct cacaggattg cacctgtgac atcctgatgg atgcttccct 2461 gtggccctcc tggggcaagg gtggacagac tcagaccccc agcatggtta gcgctgacct 2521 tcattgaggt ccctttggaa ccagatgtct tgttacagac accttcctct gtgtaagtct 2581 cctcaccttg aggggtcttt agtaatgcat ctgggtagca tctcaactgc tggtagcatt 2641 tatctgactt ggaaagttgg agaagaggca ttcctactgg agaaaaatgt cagtgttttc 2701 ctataagctc tgtgttagct attcattata tttgtgctta aagatgttcc ttcattcatc 2761 aactagggga agtccagatg cgggttatct tgaaagaaac aaactgacat tctaggcaga 2821 cagttgtcta tgtggtctga gggtcagcag ctgttagtct ccttcctttg gctcttgaga 2881 cccacacata tcactttagc cctaacaagg gctcctccca cctccacctg ttgccccagt 2941 tgaaaagcat ccattatgag ctgaggtcag cctggatctg gaattgcagc ccacataaac 3001 ataaaggagg atgtccctgg tctgttccat ccccacggat ggtgttgctg ctgggcaaca 3061 gtgttggctt cttttaagta ccccctttcc tcctcaccca cctccaaact gactagcact 3121 cagagggact tatgataaag gttcagctcc aggggtagta cctgagtgtg tgccatgccc 3181 cttcagacca gctgcttcca tcagaattcc agggtcacag ccccaacaga agcagcagtg 3241 cctctgtagg aggggtgctg ggctctggcc ttctcatgca gagaggtccg ggacagggtc 3301 agtatcgtgg gcatgtgtat agcttcccaa gttcttttac agtccctgct gggactccct 3361 gacttacttt ggttggttcc tagtgctact tgttttacaa actacacttt gtagaattga 3421 ttagattacc ttgtttattt aatgtgagtt tgtgcctttt tgtctcaatc ttccaataca 3481 ggtatattga gaaaaaaagc agtctaataa aatcctagac agaaaaaaaa aaaaaaagaa 3541 aaaaaaaaaa aaaa //