LOCUS BC068534 2797 bp mRNA linear HUM 06-OCT-2006
DEFINITION Homo sapiens zinc finger, MYM-type 6, mRNA (cDNA clone
IMAGE:4823598), complete cds.
ACCESSION BC068534
VERSION BC068534.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2797)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2797)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68509915
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2797
/db_xref="H-InvDB:HIT000263091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4823598"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2797
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
CDS 229..741
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/codon_start=1
/product="ZMYM6 protein"
/protein_id="AAH68534.1"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
/translation="MKEPLDGECGKAVVPQQELLDKIKEEPDNAQEYGCVQQPKTQES
KLKIGGVSSVNERPIAQQLNPGFQLSFASSGPSVLLPSVPAVAIKVFCSGCKKMLYKG
QTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKYKILNIPFYFTFFLVCI
LFSSNILLIL"
BASE COUNT 891 a 472 c 486 g 948 t
ORIGIN
1 gagggcggag accaaggctg cgcaggcgtg gttggccggt cgttgcgttg ggatggatca
61 ggcggaattc cagaagagaa aataatccct gtctagatgc agaggacttg gttcctattc
121 cagtgctcct ccggtagcag ggaggcgaca gaaggtgtcc aactatccat taccaagaag
181 aaatctattc gtttgagcct gagacactct ttgaggtaaa aaattagaat gaaagaacct
241 ttggatggtg aatgtggcaa agcagtggta ccacagcagg agcttctgga caaaattaaa
301 gaagaaccag acaatgctca agagtatgga tgtgtccaac agccaaaaac tcaagaaagt
361 aaattgaaaa ttggtggtgt gtcttcagtt aatgagagac ctattgccca gcagttgaac
421 ccaggctttc agctttcttt tgcatcatct ggcccaagtg tgttgcttcc ttcagttcca
481 gctgttgcta ttaaggtttt ttgttctggt tgtaaaaaaa tgctttataa gggccaaact
541 gcatatcata agacaggatc tactcagctc ttctgctcca cacgatgcat caccagacat
601 tcttcacctg cctgcctgcc acctcctccc aagaaaacct gcacaaactg ctcgaagtat
661 aaaattctta acatcccttt ttactttacc ttttttttag tgtgtatatt gtttagttca
721 aacatactgt tgatacttta aatctcttca gcatgtatct gtagaaataa ctttttagtt
781 aatggaagaa ttcaccaatt ttaaagtttt gcaacattaa ataagtgact tggtgttaga
841 atattgccta aaccagtttt ctatcacttt aaattttact atggaaagaa ataacaaatg
901 acatgtggga attgcaggac tatcctgtaa ttgtagacac ccaccattta aatttattta
961 acagttatct tgaaagctat tgggtatagc ataaaataat atcactcttt taatagtata
1021 caaaagctat ttaattcttt aaaaagtaaa aactctacat ggtcgcaaaa atgtgtttat
1081 ttctaatgtc cttgtggggt cattgttgct ttacaataat gcttagatgc agagagagga
1141 aaaaacagca acaaagtcac ataaatcttt ccctgactta gtacatttga aggatttggc
1201 atattttgcc tatttctgtg gtagtgtaat ttgaggaata cagtgtgttg ttaatagtca
1261 ctacaggcaa aaaacagtaa gagcttgctt ttaaattgtg gctctgtcat ttatctctgt
1321 gacttcgggc tagatgttta actttctaag cctccatttc tcatcagtaa ataatagttg
1381 cttcctagga ctttaatgag acagtgttag caaatggcct agcacatagc aagtacttaa
1441 aaaatggaat cctgttatta ttaataataa aaattatatc gtgcgattat ttataattaa
1501 cataaataaa tataataaat atatgtgtat ataatacata ttactatgta tacttaacat
1561 atcacttgta ggcccctatt ttgtctttgg ctgtgtttat ctgctttgtg tcttgactta
1621 aactatttaa aagtagatcc tgctatatgg aaatttccaa gtaaagagga gagaggattt
1681 ttttttttct ttgttgccca tggtagagtg atcacagctc actgcagcct tgaactcccc
1741 gggctcagat gatcctccca cctcagcctt tcaaatagct gggaccacag gcgcatacca
1801 ccatgcccga ctaatttttg tatttttttg tagagatggt tttgctatgt tgcccaggct
1861 ggtctcaaac tcctgggctc aagcaattag cctgcctcag cctcctaaag tgctgggact
1921 attggtgtga gccatcacat gtggccagga gagaggaatt ttaaaatatt tatatactct
1981 aaattagttt gttgcaaaat accattctaa ttaatgcttt tatgtcattc tcatgaaact
2041 aatctgaaag agtaaactta gttttctatt tttagatatt gtttcaacat accaaatacc
2101 aaaataaaat taaataattt taaagaacat aacacaactt atacatccaa atgcctattg
2161 ttttcttaaa agtagtcacc cccgtcagtg actttttagc ataaggttag gagacagatt
2221 cttatctttt cagcatgcat ttgattttta caaattttca aaggctgctt gataccttaa
2281 tcaggccaat atattagcta attaaattaa gtcatactgt taaaacatga tatttataaa
2341 attaaaagtt aaaaaatagt ctaagggttt atcttaagtt ttatcttaaa aaaattagaa
2401 aaatgttttg agctatgtta ttgttggaag gtgtggtttt tctacggtaa atgttacgat
2461 ataacactca tttgcatgtg taaggttcag agtacactta taatttatgt gcacagattt
2521 tcattataaa gtcattctct ttgatttaca tatttttact tgctattttt gtacttatta
2581 tgccactggc agattcacct tattaagtga aactctttat tgctctgttt tcagtagaaa
2641 aatcactttt caaaattaat acttcatctg tgtataagca tattcttttg gtttctaaga
2701 tttgctgtca tatttttaaa gttgagtttt aaagaattaa aataattttt gttgttgtta
2761 aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaa
//