LOCUS BC068520 3134 bp mRNA linear HUM 22-AUG-2008
DEFINITION Homo sapiens tRNA-yW synthesizing protein 1 homolog B (non-protein
coding), mRNA (cDNA clone MGC:87315 IMAGE:5276588), complete cds.
ACCESSION BC068520
VERSION BC068520.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3134)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3134)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50726980.
FEATURES Location/Qualifiers
source 1..3134
/db_xref="H-InvDB:HIT000263077"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87315 IMAGE:5276588"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3134
/gene="TYW1B"
/gene_synonym="RSAFD2"
/db_xref="GeneID:441250"
/db_xref="HGNC:HGNC:33908"
CDS 124..2130
/gene="TYW1B"
/gene_synonym="RSAFD2"
/codon_start=1
/product="TYW1B protein"
/protein_id="AAH68520.1"
/db_xref="GeneID:441250"
/db_xref="HGNC:HGNC:33908"
/translation="MDPSADTWDLSSPLISLWINRFYIYLGFAVSISLWICVQIVIEM
QGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTESA
EWFCKWLEEASIDFRFGKTYLKGMRDAVFGLGNSAYASHFNKVGKNVDKWLWMLGVHR
VMSRGEGDCDVVKSKHGSIEANFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESH
QHGSEEREEGSQEQDELHHRDTKEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMD
HVKKEKREKEQQEEKSGLFRNMGRNEDGERRAMITPALREALTKQVDAPRERSLLQTH
ILWNESHRCMETTPSLACANKCVFCWWHHNNPVGTEWLWKMDQPEMILKEAIENHQNM
IKQFKGVPGVKAERFEEGMTVKHCALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNA
QFPAEIRNLEPVTQLYVSVDASTKDSLKKIDRPLFKDFWQQFLDSLKALAVKQQRTVY
RLTLVKAWNVDELQAYAQLVSLGNPDFIEVKGVTYCRESSASSLTMAHVPWHEEVVQF
VRELVDLIPEYEIACEHEHSNCLLIAHRKFKIGGEWWTWIDYNRFQELIQEYEDSGGS
KTFSAKDYMARTPHWALFGANERSFDPKDTRHQRKNKSKAISGC"
BASE COUNT 917 a 668 c 768 g 781 t
ORIGIN
1 agttctgcag ccactcggta cggcgctaac gccgcgaggt agctcggtgc gtctcgcagt
61 accagtgcga acctttgggc tctccaggtc cgagatccta gtctcctgtc ggctctgagg
121 aggatggatc cttctgcgga tacatgggac ctctcctcac ctttaatatc attatggata
181 aacaggtttt acatttatct gggctttgct gttagcatta gcctttggat ttgtgtccag
241 attgtcatcg agatgcaggg atttgcaaca gttcttgctg aagcagttac gtccctggat
301 ctgcctgtgg ccattattaa tctaaaagaa tatgatccag atgatcatct gatagaagag
361 gtgactagta aaaatgtctg tgtcttcctg gttgcgacat acactgacgg cctaccaacc
421 gaaagtgcag agtggttctg caaatggtta gaggaagcat ccattgattt tcgatttggc
481 aaaacttacc tgaagggtat gagagatgcg gtatttggcc tgggaaattc tgcctatgct
541 agccacttca acaaggttgg caaaaatgtt gacaagtggc tctggatgct tggcgtgcat
601 cgtgtgatga gtcgagggga gggcgactgc gacgtggtta aaagcaagca cggcagcatt
661 gaggccaact tcagagcatg gaagaccaag ttcatctccc agctgcaggc acttcagaaa
721 ggggagagaa agaagtcctg tggcggccac tgcaagaaag gcaaatgtga atctcaccaa
781 catggctcag aggagaggga ggaaggatct caagagcagg acgaattgca tcacagagac
841 accaaggagg aagaaccctt cgagagctcc agtgaagaag agtttggtgg tgaggaccat
901 cagagcctaa attccattgt tgatgttgaa gatttgggca aaattatgga tcacgtgaag
961 aaagaaaaga gagaaaagga acagcaggaa gagaagtctg gtttgttcag gaacatgggg
1021 aggaatgaag atggtgaaag aagagctatg ataactcctg ctctccgaga agcccttact
1081 aaacaagtcg atgctccgag ggagaggagc ttgttacaaa cacacattct atggaatgag
1141 agccatcgct gcatggaaac caccccgagc ttggcgtgtg ctaataaatg tgtcttctgt
1201 tggtggcacc acaacaaccc tgtgggcact gaatggttgt ggaagatgga ccagcctgaa
1261 atgatcttga aggaagccat tgaaaaccat cagaacatga ttaagcagtt taaaggagta
1321 ccgggcgtca aagcagaacg ctttgaagaa ggaatgacgg taaagcactg tgcattgtcc
1381 ctcgtgggag aaccaataat gtacccagag atcaacaggt ttttgaagct actccaccag
1441 tgtaaaatct ccagcttcct ggtcacaaat gcacaatttc ctgcggaaat caggaacctc
1501 gagccagtta ctcagctgta tgtcagtgtg gatgccagta ccaaagacag cctgaagaaa
1561 atcgaccgcc cactcttcaa ggatttctgg cagcaattcc ttgacagttt aaaagccttg
1621 gcagtcaagc aacaacgaac tgtctacaga ctgacgctcg tgaaagcatg gaacgtggac
1681 gagctccagg cctacgcgca gctcgtgtcc ctggggaatc ctgacttcat cgaagtgaag
1741 ggcgttacct actgcagaga aagttcagca agcagtctta ccatggccca tgtgccctgg
1801 catgaggaag tggtacagtt tgtccgcgag ctggtggatc tgatccccga atatgaaatt
1861 gcatgtgaac acgaacactc taattgcctc ctgatagcac acagaaagtt taaaattggt
1921 ggtgaatggt ggacatggat cgattataac cgcttccagg agctcatcca ggaatatgaa
1981 gatagtggtg gatcaaaaac gttcagcgca aaggattata tggccagaac tcctcactgg
2041 gcattatttg gtgccaatga aagaagcttt gatcccaagg acacaagaca tcagagaaag
2101 aacaaatcaa aggctatttc tggatgttga gattatctga tttcaaggta ctgaaggaca
2161 aaaacttgga tggcctcaaa aggttcttga acaccactct gattctccaa ggacgaatta
2221 cgtaaattat actttcatac aaaggagacg ataaggcagt aaacatggag acacggggga
2281 cagcgtccac actcagaggg cctgggccac agccccgatg tttcttttca gaactcagcc
2341 cctttcctga ttttacttct aagaggaaaa ttattttggg gaggaactac acagtcgtga
2401 ttagaattta actgatggtt ttgtattata acttctaaga cctgccagaa tgctagtcct
2461 gagagtgtca gacaaggaag aaatccctgg gcctcttccc ctcacctggc ccttggattt
2521 catggagcag ccacttagca ttgaattgca ctaccctgag ctaaacgtgt ctgtgctttc
2581 taagataaga gcttgatccc tttcttctgt cttaagacag cacctcctga aaagaatcga
2641 agttgtcaca actctcaatt attttttaaa tactgcatag attgagtttt ggtttattac
2701 taacccttcc caaaattgca tcggatctaa aactactaga tctcatccca ttcccatgta
2761 aattaccaca gaccgcagta ccggggctgg agcggagtga agctgtctgc tgtaagagga
2821 gtggccatgt gagggcatgg agtcattagt ctcacaaaca cactttggac tgaagaggat
2881 catttctttt tgttcgtgag gtcactgtcc gggcctctca tatcacgacc agacggcggg
2941 tctccatctt ctttgactcc tgtggccctc gctgctttac acaatctgtt ctataaggtt
3001 caggtgtttt caagttggaa agatcataaa tactcaaaat tgttttcaag ttagcaaatt
3061 cttttaacag tcttttatgc aaaaattgaa ttaataaaat aatattttgt aaaaaaaaca
3121 aaaaaaaaaa aaaa
//