LOCUS BC068516 2811 bp mRNA linear HUM 25-OCT-2007
DEFINITION Homo sapiens acyl-CoA synthetase medium-chain family member 5, mRNA
(cDNA clone MGC:87308 IMAGE:5261244), complete cds.
ACCESSION BC068516
VERSION BC068516.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2811)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2811)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505219.
FEATURES Location/Qualifiers
source 1..2811
/db_xref="H-InvDB:HIT000263073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87308 IMAGE:5261244"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2811
/gene="ACSM5"
/db_xref="GeneID:54988"
/db_xref="HGNC:HGNC:26060"
CDS 148..1887
/gene="ACSM5"
/codon_start=1
/product="acyl-CoA synthetase medium-chain family member
5"
/protein_id="AAH68516.1"
/db_xref="GeneID:54988"
/db_xref="HGNC:HGNC:26060"
/translation="MRPWLRHLVLQALRNSRAFCGSHGKPAPLPVPQKIVATWEAISL
GRQLVPEYFNFAHDVLDVWSRLEEAGHRPPNPAFWWVNGTGAEIKWSFEELGKQSRKA
ANVLGGACGLQPGDRMMLVLPRLPEWWLVSVACMRTGTVMIPGVTQLTEKDLKYRLQA
SRAKSIITSDSLAPRVDAISAECPSLQTKLLVSDSSRPGWLNFRELLREASTEHNCMR
TKSRDPLAIYFTSGTTGAPKMVEHSQSSYGLGFVASGRRWVALTESDIFWNTTDTGWV
KAAWTLFSAWPNGSCIFVHELPRVDAKVILNTLSKFPITTLCCVPTIFRLLVQEDLTR
YQFQSLRHCLTGGEALNPDVREKWKHQTGVELYEGYGQSETVVICANPKGMKIKSGSM
GKASPPYDVQIVDDEGNVLPPGEEGNVAVRIRPTRPFCFFNCYLDNPEKTAASEQGDF
YITGDRARMDKDGYFWFMGRNDDVINSSSYRIGPVEVESALAEHPAVLESAAVSSPDP
IRGEVVKAFIVLTPAYSSHDPEALTRELQEHVKRVTAPYKYPRKVAFVSELPKTVSGK
IQRSKLRSQEWGK"
BASE COUNT 766 a 663 c 745 g 637 t
ORIGIN
1 gcatttgggg ctgaagttcc ctgtgggagg ctgttttctg agggagctga gtgtttacag
61 ccactcagcc ctgctctgct cagctgaagc agaaaacaga gaccttttgc attactttgg
121 ttcaagagca agacaggagg cgactgcatg agaccatggc tgagacacct agtcctccag
181 gcactgagga actccagggc attctgtggg tctcatggga agccagcacc tctacctgtt
241 cctcagaaga tcgtggccac ctgggaagcc atcagcctgg gaaggcagct ggtgcctgag
301 tacttcaact tcgcccatga tgtgctggat gtgtggagtc ggctggaaga ggctggacac
361 cgccccccaa atcctgcctt ctggtgggtc aatggcacag gagcagagat caagtggagc
421 tttgaggagc tggggaagca gtccaggaag gcagccaatg tgctgggggg tgcatgcggc
481 ctgcagcctg gggacagaat gatgctggta ctcccacggc tcccggagtg gtggctggtc
541 agtgtggctt gcatgcggac agggactgtg atgattccgg gtgtgactca gctgacagag
601 aaggacctca agtaccggct gcaggcgtcc agggccaagt ccattatcac cagtgactcc
661 ctagctccaa gggtggatgc catcagtgcc gaatgcccct ccctccagac caagctgctg
721 gtgtcagaca gcagtcggcc aggctggttg aacttcaggg aactcctccg ggaggcttct
781 acagagcaca actgcatgag gacaaagagt cgagacccgc tggccatcta ctttaccagc
841 ggaaccaccg gggcccccaa gatggtcgag cactcccaga gcagctacgg actgggtttt
901 gtggccagcg gaagacggtg ggtggccttg accgaatctg acatcttctg gaacacgact
961 gacactggct gggtgaaggc agcctggact ctcttctctg cctggcctaa tggatcttgc
1021 atttttgtgc atgagctgcc ccgagttgat gccaaagtta tcctgaatac tctctccaaa
1081 ttcccgataa ccaccctctg ctgtgtccca accatctttc ggctgcttgt gcaggaggat
1141 ctgaccaggt accagtttca gagcctgagg cactgtctga ccggaggaga ggccctcaac
1201 cctgacgtga gggagaagtg gaaacaccag actggtgtgg agctgtacga aggctatggc
1261 cagtctgaaa cggttgtcat ctgtgccaat ccaaaaggca tgaaaatcaa gtctggatcc
1321 atggggaagg cgtccccacc ctacgatgtg cagattgtgg atgatgaggg caacgtcctg
1381 cctcctggag aagaggggaa tgttgccgtc cgtatcagac ccactcggcc cttctgtttc
1441 ttcaattgct atttggacaa tcctgagaag acagctgcat cagaacaagg ggacttttac
1501 atcacagggg accgagctcg catggacaag gatggctact tttggttcat gggaagaaac
1561 gacgatgtga tcaattcttc aagctaccgg atcgggcctg ttgaagtgga aagtgccctg
1621 gcagagcatc ctgctgtcct ggagtcggct gcggtcagca gcccagaccc catcagggga
1681 gaggtggtaa aggcatttat agtccttact ccagcctact cctctcatga cccagaggca
1741 ctaacgcggg aactccagga gcatgtgaaa agggtgactg ctccatacaa ataccccagg
1801 aaggtggcct ttgtttcaga actgccaaag acggtttctg gaaagatcca aaggagtaaa
1861 ttgcgaagtc aggagtgggg gaaatgaggt gcaccccagg aaggccccgt agacctccga
1921 agactccaca agaaactaat ggatcactgg tcagtcccca tggggagcat catctcttcg
1981 accctaaaga tgtcaaaggt gtgcagcttc caaacggcat ccccaggatc actgggcaat
2041 gctggaaaga gcaaaagaat atcattggcc ctgatcacat agatgctgcg ccgcctagca
2101 aatgcttggt ggttcgactt ctccctctgt ctgggggcag gctcagcatc tgcccactgg
2161 tctcactaag agctttcaga tttccctcca taggacaggt taccatagac ttggggcact
2221 tgtgggtact cattttctgc cagtgggaat gtaaaggctt catcctttgt atgtaaccat
2281 ttggcaaaag tatgcaggaa cataaaataa aatatccttt agctcagaaa ttctatcttc
2341 gggagtcacc acaaaagaaa aaaatcaaaa tgcagaaaat gtgtggtgca ctaagatgat
2401 cacacagcat taaaactaaa aaaaaaaaag aaaaaattaa caattaacat ccaaacaaca
2461 aggaaatgat taacaaaatt gtagtagatt aactcaatta catatgatgt agccactaaa
2521 atatttgaga gcagtttagt atgtcttggg aaaagtgtaa gctatattaa ttttaaaaat
2581 cagagcaaaa atattcatac tggagaatcc caactctgaa aaataaaggg aaaactgtgg
2641 ttaattgtaa tcctcctgga gattgaggag ggagggagag aaaataatgg atggtagttt
2701 ttcttcttcc tttttccatt acatttctgt attttccaag tttttgtacg aagcacatac
2761 aactatttta atgaaaaagt tatgttaaag aaaacaaaaa aaaaaaaaaa a
//