LOCUS BC068448 3369 bp mRNA linear HUM 17-DEC-2007 DEFINITION Homo sapiens N-terminal EF-hand calcium binding protein 1, mRNA (cDNA clone MGC:86997 IMAGE:5264496), complete cds. ACCESSION BC068448 VERSION BC068448.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3369) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3369) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: k Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377716. FEATURES Location/Qualifiers source 1..3369 /db_xref="H-InvDB:HIT000263006" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:86997 IMAGE:5264496" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3369 /gene="NECAB1" /gene_synonym="STIP-1" /db_xref="GeneID:64168" /db_xref="HGNC:HGNC:20983" CDS 108..1163 /gene="NECAB1" /gene_synonym="STIP-1" /codon_start=1 /product="N-terminal EF-hand calcium binding protein 1" /protein_id="AAH68448.1" /db_xref="GeneID:64168" /db_xref="HGNC:HGNC:20983" /translation="MEDSQETSPSSNNSSEELSSALHLSKGMSIFLDILRRADKNDDG KLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAA LEGLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQ TRQERQGPAKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQI NRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYV ESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETP ELTSTMLVPASWWILNN" BASE COUNT 1182 a 593 c 608 g 986 t ORIGIN 1 ggatccagag cccggcggcg gcgaagcagc agctgcggcc gcgcccttgc cagagccggt 61 gcgtccgcct agccccgctc cgcctgaggc cgtcagggct cccgaggatg gaagattccc 121 aggagacatc gccgtcctcc aacaactcct cggaggagct cagctctgct ctgcacctgt 181 ccaagggcat gtcgatcttc ctcgacatac tgaggagagc agacaaaaat gatgatggaa 241 aattatcctt tgaagaattc aaagcatatt ttgcagatgg tgttctcagt ggagaagaat 301 tacacgagct tttccatacc attgatacac ataatactaa taatcttgac acagaagagc 361 tatgtgaata tttttctcag cacttgggcg agtatgagaa tgtactagca gcacttgaag 421 gcctgaatct ttccatcctg aaggcaatgg gcaaaacaaa gaaagactac caagaagcct 481 ccaatttgga acaattcgta actagatttt tattgaagga aaccctgaat cagctgcagt 541 ctctccagaa ttccctggaa tgtgccatgg aaactactga ggagcaaacc cgtcaagaaa 601 ggcaagggcc agccaagcca gaagtcctgt cgattcaatg gcctggaaaa cgatcaagcc 661 gccgagtcca gagacacaac agcttctccc caaacagccc tcagtttaat gtcagcggtc 721 caggcttatt agaagaagac aaccagtgga tgacccagat aaatagactc cagaaattaa 781 ttgatagact ggaaaagaag gatctcaaac tcgaaccacc agaagaagaa attattgaag 841 ggaatactaa atctcacatc atgcttgtgc agcggcagat gtctgtgata gaagaggacc 901 tggaagaatt ccagctcgct ctgaaacact acgtggagag tgcttcctct caaagtggat 961 gcttgcgtat ttctatacag aagctttcaa atgaatctcg ctacatgatc tatgagttct 1021 gggagaatag tagtgtatgg aatagccacc ttcagacaaa ttatagcaag acattccaaa 1081 gaagtaatgt ggatttcttg gaaactccag aactcacatc tacaatgcta gttcctgctt 1141 cgtggtggat cctgaacaac tagatgttcc tagacatttt ctttatggtt ccaagtgcaa 1201 aacaggtgtt cttatctaaa acgtcaatta gaaaattatc tgcggttgtt aatctactgt 1261 atatttttgt ttggtatatt tactaagtgc actctttcaa aacttattct ataactttat 1321 caattcatgt gaattttagc tcaattttca aagttcacta atattctcaa tatttaatgc 1381 taaatgcttt gctacattgt aactcaccta aaacctttta gtgacaaaat cctaatatgt 1441 ggaaaaaagc atatgcataa aggaataata ttgtgaaaat gaatctgtta tgataaagaa 1501 aaaataaagt ggaaactttt agagtattac ttcatagggc agattttgta aactgtcgta 1561 tactgtaaag ggttaaatca gcgttttgtg atttttaagt aactgtgagt gaagtttatt 1621 cttcaacaat gtctactcca tccccaaccc aactcacagc cctatgacta ctatctttgc 1681 attagttaaa aagttagtat ataggcatca aacaaccttg gctgtaacct atagaatctc 1741 tatccacgta tcaggttata gactggtttt tcaaaagtga acaatcctgt gataagttgg 1801 agtaccattt agtaatacag caacattgtg tcatttatta gcatcataat tctttgttat 1861 gtaagttaaa tatatcaaga aagaagagac tgtttggaaa aatgtggttc aagttttatg 1921 ctatatagtt ttggtatgcg atacagacag ctaacttttc ttatgaaaaa tacatatttg 1981 catgtaaaca atgatttcaa aatacttgaa aaataaaatt ttaacccaaa tgaataacta 2041 agaaatataa aacaagcaca aaatcttagg gaagtcataa aatagtagtg aaagtattag 2101 acagaagaca tctgttttcg aatttcaaca ctagaatgac taaaactatc tacctataga 2161 actatctgta gatagtatac tatctacact ctgctcaaca agctcagaaa ttaaatattt 2221 ttaataataa aaatctgttc tggttataaa ccttgctaat gaaaatacaa tacatataaa 2281 aatgtatagc catgttattt tctagtataa attcctttga aactataagt ctttgaggaa 2341 aattataagg taaaattttc ctgtttttcc ccctttgaaa aactcaggaa aaaaggaaga 2401 ttgaactaat aaaattttat ttcttaaata taaatttgac ctaaaatatt ttctcaaact 2461 aattcatgaa acagcaactt ttaccaatac ctttgtatac tctcagttct cattcagtat 2521 aaataaaatt ttaaaatcct ttcatagttc tattagaaat aagtagtaaa ttttgatata 2581 ttgtacatac acacgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtatttgt 2641 gtgcctctgg tcaactctaa ggatgacaga cactgtgtaa caacacctgg gtcaactctt 2701 ttaatttata tacaaagcaa agaacaacat taatggagat gcacaatgat tattcaaaca 2761 agctatatat atgtacaaag gcaaacagac acataacagt ctctgcagac tgattgtata 2821 tagtaagaaa agatcaaaag actttaaaac ctaaatgact tttgacatac aaactcttct 2881 tgagaatgtt tgttgtaaat ggtttcaaaa atacaaatta tagccaatca aaacattgct 2941 ttggttggtg catttaagta tccaactcaa aaagcatatc aaatattttg ggtactaggc 3001 agtttccaaa gtagcatggt agtattactt gttaaaaggg ttctgttttc attaacagta 3061 ctaagtggaa gggatctgca gattccaaac tggaataagc tctatcatat tctgaaacaa 3121 gaattagaat gacatgagaa cgggcaaata acaaagcaaa ccaatataat tatatggtca 3181 ttctgacccc agctcttata caaattatac atgtattttt gtgtatgttt gtgagagttg 3241 tatgtatgtg aatgtgtgtg agtgtgtatt cacatacaca tatatactgg aacctatagt 3301 agaaaaggaa actagtaggg ccaaaaaaaa aaagaaaaag aaaaagaaaa aagaaaaaaa 3361 aaaaaaaaa //