LOCUS BC068292 2004 bp mRNA linear HTC 18-MAR-2009
DEFINITION Homo sapiens basic helix-loop-helix family, member e40, mRNA (cDNA
clone IMAGE:3919132).
ACCESSION BC068292
VERSION BC068292.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2004)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2004)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503298
This clone has the following problem: no polyA-tail.
FEATURES Location/Qualifiers
source 1..2004
/db_xref="H-InvDB:HIT000262995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3919132"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 488 a 572 c 528 g 416 t
ORIGIN
1 ctgagtcgga gccagaggcc gcggggacac cgggccatgc acgcccccaa ctgaagctgc
61 atctcaaagc cgaagattcc agcagcccag gggatttcaa agagctcaga ctcagaggaa
121 catctgcgga gagacccccg aagccctctc cagggcagtc ctcatccaga cgctccgcta
181 gtgcagacag gagcgcgcag tggccccggc tcgccgcgcc atggagcgga tccccagcgc
241 gcaaccaccc cccgcctgcc tgcccaaagc accgggactg gagcacggag acctaccagg
301 gatgtaccct gcccacatgt accaagtgta caagtcaaga cggggaataa agcggagcga
361 ggacagcaag gagacctaca aattgccgca ccggctcatc gagaaaaaga gacgtgaccg
421 gattaacgag tgcatcgccc agctgaagga tctcctaccc gaacatctca aacttacaac
481 tttgggtcac ttggaaaaag cagtggttct tgaacttacc ttgaagcatg tgaaagcact
541 aacaaaccta attgatcagc agcagcagaa aatcattgcc ctgcagagtg gtttacaagc
601 tggtgagctg tcagggagaa atgtcgaaac aggtcaagag atgttctgct caggtttcca
661 gacatgtgcc cgggaggtgc ttcagtatct ggccaagcac gagaacactc gggacctgaa
721 gtcttcgcag cttgtcaccc acctccaccg ggtggtctcg gagctgctgc agggtggtac
781 ctccaggaag ccatcagacc cagctcccaa agtgatggac ttcaaggaaa aacccagctc
841 tccggccaaa ggctcggaag gtcctgggaa aaactgcgtg ccagtcatcc agcggacttt
901 cgctcactcg agtggggagc agagcggcag cgacacggac acagacagtg gctatggagg
961 agaatcggag aagggcgact tgcgcagtga gcagccgtgc ttcaaaagtg accacggacg
1021 caggttcacg atgggagaaa ggatcggcgc aattaagcaa gagtccgaag aaccccccac
1081 aaaaaagaac cggatgcagc tttcggatga tgaaggccat ttcactagca gtgacctgat
1141 cagctccccg ttcctgggcc cacacccaca ccagcctcct ttctgcctgc ccttctacct
1201 gatcccacct tcagcgactg cctacctgcc catgctggag aagtgctggt atcccacctc
1261 agtgccagtg ctatacccag gcctcaacgc ctctgccgca gccctctcta gcttcatgaa
1321 cccagacaag atctcggctc ccttgctcat gccccagaga ctcccttctc ccttgccagc
1381 tcatccgtcc gtcgactctt ctgtcttgct ccaagctctg aagccaatcc cccctttaaa
1441 cttagaaacc aaagactaaa ctctctaggg gatcctgctg ctttgctttc cttcctcgct
1501 acttcctaaa aagcaacaaa aaagtttttg tgaatgctgc aagattgttg cattgtgtat
1561 actgagataa tctgaggcat ggagagcaga ttcagggtgt gtgtgtgtgt gtgtgtgtgt
1621 gtgtgtatgt gcgtgtgcgt gcacatgtgt gcctgcgtgt tggtatagga ctttaaagct
1681 ccttttggca tagggaagtc acgaaggatt gcttgacatc aggagacttg ggggggattg
1741 tagcagacgt ctgggctttt ccccacccag agaatagccc ccttcgatac acatcagctg
1801 gattttcaaa agcttcaaag tcttggtctg tgagtcactc ttcagtttgg gagctgggtc
1861 tgtggctttg atcagaaggt actttcaaaa gagggctttc cagggctcag ctcccaacca
1921 gctgttagga ccccaccctt ttgcctttat tgtcgacgtc tggtgagtca cgtcgacaat
1981 aaaggcctag atccgagcgg ccgc
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