LOCUS BC068262 4719 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5272879, containing frame-shift
errors.
ACCESSION BC068262
VERSION BC068262.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51173721
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4719
/db_xref="H-InvDB:HIT000262986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272879"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1155 a 1367 c 1363 g 834 t
ORIGIN
1 gacgccgtcg ccgccgctgc tgccgccgcc gctgccacag cctttgccgc cacggtctcc
61 gccgccgctg tcctcgcgct gcctctggga gcctccattg ttccagcagc gcccggtccc
121 gagaccgggc atcttggggg ctcgcgaaac gggcggcggc cgacggagtt gagaccccag
181 ggcgccggcg ggaccaggag cggcaggggt cagctcagga atcccgggga gccgggacca
241 aagcgtgggg cggcaggggg ccggggtggc gaggtctacg gtctccggag ttggggctcc
301 cccttcccgg cccgactttc cccgccgacc tccccaagtg gggtcggagc cccggcgggc
361 gcccccggcg atgagcccgg actcgaggtg gccgatgtga cagcatgggg gtggactttg
421 atgtgaagac tttctgccac aacttgcggg cgactaagcc accatacgag tgcccggtgg
481 agacctgccg aaaggtctac aagagttaca gtggtattga gtaccacctg taccactatg
541 accacgacaa cccaccaccc ccacaacaaa ctccactccg caagcacaag aaaaaggggc
601 gccagtcacg cccagccaac aagcagtcac ccagcccctc agaggtctca cagtcaccag
661 gccgtgaggt gatgagctat gcacaggccc agcgcatggt ggaggtggac ttgcatggcc
721 gcgtccaccg catcagcatc tttgacaacc tggatgtggt gtcagaggat gaggaagccc
781 ccgaggaggc ccctgagaat ggcagcaaca aggagaacac tgagacacca gctgctactc
841 ccaagtcagg caaacataag aacaaggaga agcgcaagga ctccaaccat caccaccacc
901 acaatgtttc tgcgagcacc actcccaagc tgccagaggt ggtctatcgg gagctggaac
961 aggacacccc tgatgcccca ccccggccaa cttcctatta ccggtacatc gagaagtctg
1021 cagaggagct ggacgaggaa gtagagtatg acatggacga ggaggactac atctggctgg
1081 atatcatgaa tgagcgtcgg aagacagagg gtgtaagtcc catcccgcag gagatctttg
1141 agtacctaat ggaccgactg gagaaggagt cgtactttga gagtcataat aaaggcgacc
1201 ctaatgcgct agtggacgag gatgctgttt gctgtatctg caatgatggt gagtgccaga
1261 acagcaatgt catcctcttc tgtgacatgt gcaacctggc cgtgcaccag gagtgctacg
1321 gtgtccccta tatccctgag gccagtggct gtgcgccgtt gcctgcagtc accctctcgt
1381 gctgtggatt gtgccctgtg ccccaacaag ggcggtgcct tcaagcagac agatgacggg
1441 cgctgggccc atgtggtgtg tgccttgtgg atccctgagg tctgcttcgc caacacggtc
1501 ttcctagagc ctattgacag cattgagcac atcccaccag ctcgctgaag ctcacctgct
1561 acatttgcaa acaacggggc tcaggggcct gcatccagtg ccacaaggcc aactgttaca
1621 cagctttcca tgtgacatgc gcccagcagg ctggccttta catgaagatg gagcctgtgc
1681 gggagacagg cgccaacgca cctctttcag tgtccgcaag acagcctact gcgacatcca
1741 cacgcctcca ggttcagcac gccgactgcc tgccctgtcc cacagcgagg gtgaggagga
1801 tgaagatgag gaggaggatg agggtaaggg ctggagctca gagaaagtca gaaggccaag
1861 gccaagtccc ggatcaaaat gaagaaggca cggaagatcc tggcagagaa gcgggcagca
1921 gcacctgtgg tgtcagtgcc ctgcatccca ccacacaggc ttagtaaaat caccaaccgc
1981 ctgaccatcc aaaggaagag ccagttcatg cagaggctgc acagctactg gacactgaag
2041 cggcagtcac ggaatggggt cccattgcta cgtcgcctgc agacacacct gcaatctcag
2101 aggaactgtg accaagttgg gagagattct gaggataaga actgggccct taaagaacag
2161 ctcaagtcct ggcagcggct ccggcatgac ttggagcgag ctcggctgct cgtggaattg
2221 atccgcaagc gggaaaaact caaaagggag acgatcaagg ttcagcagat tgccatggag
2281 atgcagctga ctcctttcct catcctcctt cgcaaaacct tggagcagct ccaagagaag
2341 gacacaggca acatcttcag cgagccggtc cctctgtctg aggtacctga ctacctagac
2401 cacatcaaaa agcccatgga ctttttcacc atgaagcaga acttggaggc ttaccgctac
2461 ctgaattttg atgattttga ggaggacttc aacctcatcg tcagcaactg cctcaagtat
2521 aacgccaagg acaccatctt ctaccgggca gcagtgcggc ttcgtgagca gggtggtgct
2581 gtgctccgcc agcccggcgc caggcagaaa aaatgggcat tgactttgag acgggcatgc
2641 atatccccca cagcctggct ggagatgagg ccacacacca cactgaagat gccgaggaag
2701 agcggctggt cttgctggag aaccagaagc acctgccagt ggaagaacag ctaaagctgc
2761 ttctggagcg gctggacgaa gtgaatgcca gcaagcagag tgtgggccgc tcacgcgtgc
2821 aaagatgatc aagaaagaga tgacggcact gcggcggaca gttgcccatc agcgagagac
2881 gggacgtgat ggccctgagc ggcatggccc ctcgagccgg ggtagtctga caccccaccc
2941 ggcagcctgt gacaaggatg ggcagacaga tagtgcggca gaggagagca gcagccagga
3001 gacaagcaaa ggcctgggtc ccaacatgtc ctcaaccccc gcacatgagg tgggcaggag
3061 aacctcagtt ctgttctcca aaaagaaccc gaagacagct ggaccgccca agaggccggg
3121 ccggcccccc aaaaaccggg agagccagat gacccccagc cacggaggca gtcctgtggg
3181 gcccccccag ctccccatca tgagttccct gcgtcagcgc aagcggggta ggagcccccg
3241 gcccagttcg agctcagaca gcgacagtga taagtccaca gaagaccccc caatggactt
3301 accagccaat ggcttcagcg gtggaaacca accagtgaag aagagtttct tggtataccg
3361 taatgactgc agccttcccc ggagcagctc agactctgag tccagcagca gtagcagtag
3421 cagcgctgct tcagaccgga ccagcacaac gccctcaaaa caaggccggg gcaaaccctc
3481 cttctctcgg ggcactttcc cagaggacag cagtgaggat acctcaggca ctgagaatga
3541 ggcctactcc gtgggcactg gccgcggcgt gggccacagc atggtaagga agagtctggg
3601 ccggggagct ggctggctgt cagaggatga ggactccccg ctggatgctc tggacctcgt
3661 gtgggccaaa tgccgaggct atccatcata cccagctctg atcattgatc caaagatgcc
3721 ccgagaaggt atgttccacc atggggttcc catccctgtg cccccactgg aggtgctgaa
3781 acttggggag cagatgaccc aggaagcccg agagcatctc tacctcgtcc tcttctttga
3841 caacaaacga acctggcagt ggctgcccag gaccaagctg gttcctctgg gtgtgaacca
3901 ggacctagac aaggagaaga tgctggaggg ccgcaagtcc aacatccgca agtcagtaca
3961 gatcgcctac cacagggctc tgcagcaccg cagcaaggtg caaggcgagc agagcagtga
4021 gaccagcgat agtgattgat actgctcaac acagcccaac ctatagtgcc ctgtgacttc
4081 tctcctcccc tttgctcact gtcctggagt ggcaccggcc tctgcactga ctcatttctg
4141 gtcttggggc cagtctcagg ggaagctggg tgggggaggt ccctcctgcc ctaagtgcag
4201 ctggactgta cagaacactc caagggccaa tggcagttca gcgcaaggag agggagggcc
4261 cacaggtcag aaaaagctcc agagacctca cagcattgta gggcggggtg gtgggccaaa
4321 gttaggacac tgcgtaaaac aggccatccc accacctcta cctgctcatg ccaggagaat
4381 ccataactgc ctagaggcct ggggccccta ccggtcgtga ggtgagtggg catctgtcca
4441 gcctggaaga ggggcactag gtgactccct cccctgctgt tgtaaatact gtaattatcg
4501 gagaatttaa attattctca tttgtaactg cgtttccggg tcgcgccaga gtcatttggt
4561 actaaaaaaa aaaaaaaaaa aagactgggg gctgtcccca tttcccttct ctttcccata
4621 gattccccca cctttcaaac tggtttgtat ttatttcaaa ggaagaaaat atattgattc
4681 ttagaaaata aactgtcaat ttagaaaaaa aaaaaaaaa
//