LOCUS BC068068 822 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 3, mRNA (cDNA
clone MGC:78581 IMAGE:6428428), complete cds.
ACCESSION BC068068
VERSION BC068068.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 822)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 822)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504982.
FEATURES Location/Qualifiers
source 1..822
/db_xref="H-InvDB:HIT000262928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78581 IMAGE:6428428"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..822
/gene="LGALS3"
/gene_synonym="CBP35"
/gene_synonym="GAL3"
/gene_synonym="GALBP"
/gene_synonym="GALIG"
/gene_synonym="MAC2"
/db_xref="GeneID:3958"
/db_xref="HGNC:HGNC:6563"
/db_xref="MIM:153619"
CDS 35..787
/gene="LGALS3"
/gene_synonym="CBP35"
/gene_synonym="GAL3"
/gene_synonym="GALBP"
/gene_synonym="GALIG"
/gene_synonym="MAC2"
/codon_start=1
/product="lectin, galactoside-binding, soluble, 3"
/protein_id="AAH68068.1"
/db_xref="GeneID:3958"
/db_xref="HGNC:HGNC:6563"
/db_xref="MIM:153619"
/translation="MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGA
YPGQAPPGAYPGQAPPGAYHGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSAPGAYP
ATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFN
PRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIHVLVEPDHFKVAVNDAHL
LQYNHRVKKLNEISKLGISGDIDLTSASYTMI"
BASE COUNT 220 a 221 c 211 g 170 t
ORIGIN
1 cagcagccgt ccggagccag ccaacgagcg gaaaatggca gacaattttt cgctccatga
61 tgcgttatct gggtctggaa acccaaaccc tcaaggatgg cctggcgcat gggggaacca
121 gcctgctggg gcagggggct acccaggggc ttcctatcct ggggcctacc ccgggcaggc
181 acccccaggg gcttatcctg gacaggcacc tccaggcgcc taccatggag cacctggagc
241 ttatcccgga gcacctgcac ctggagtcta cccagggcca cccagcggcc ctggggccta
301 cccatcttct ggacagccaa gtgcccccgg agcctaccct gccactggcc cctatggcgc
361 ccctgctggg ccactgattg tgccttataa cctgcctttg cctgggggag tggtgcctcg
421 catgctgata acaattctgg gcacggtgaa gcccaatgca aacagaattg ctttagattt
481 ccaaagaggg aatgatgttg ccttccactt taacccacgc ttcaatgaga acaacaggag
541 agtcattgtt tgcaatacaa agctggataa taactgggga agggaagaaa gacagtcggt
601 tttcccattt gaaagtggga aaccattcaa aatacatgta ctggttgaac ctgaccactt
661 caaggttgca gtgaatgatg ctcacttgtt gcagtacaat catcgggtta aaaaactcaa
721 tgaaatcagc aaactgggaa tttctggtga catagacctc accagtgctt catataccat
781 gatataatct gaaaggggca gattaaaaaa aaaaaaaaaa aa
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