LOCUS BC068006 2003 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens ELKS/RAB6-interacting/CAST family member 1, mRNA (cDNA clone IMAGE:6142241), partial cds. ACCESSION BC068006 VERSION BC068006.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2003) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2003) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: i Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38045897. FEATURES Location/Qualifiers source 1..2003 /db_xref="H-InvDB:HIT000262881" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6142241" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2003 /gene="ERC1" /gene_synonym="Cast2" /gene_synonym="ELKS" /db_xref="GeneID:23085" /db_xref="HGNC:HGNC:17072" /db_xref="MIM:607127" CDS 123..>2003 /gene="ERC1" /gene_synonym="Cast2" /gene_synonym="ELKS" /codon_start=1 /product="ERC1 protein" /protein_id="AAH68006.1" /db_xref="GeneID:23085" /db_xref="HGNC:HGNC:17072" /db_xref="MIM:607127" /translation="MYGSARSVGKVEPSSQSPGRSPRLPRSPRLGHRRTNSTGGSSGS SVGGGSGKTLSMENIQSLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGV RMTAMGSSPNIASSGVASDTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKE VLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVV QEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHER QAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTR RLAEAEMHVHHLESLLEQKEKENSMLREEMHRRFENAPDSAKTKALQTVIEMKDSKIS SMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRK DTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKET MLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM SSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKK KKK" BASE COUNT 642 a 402 c 538 g 421 t ORIGIN 1 ctggggacct tcttctgatt aaccttaaac caacttgtag ccatagagac acctcacaag 61 gttcccattt ttgttgttgt tgttgttgat tttctgctca cacctttcct gaccttgcaa 121 ccatgtatgg aagtgcccgc tctgttggga aggtggagcc gagcagccag agccctgggc 181 gttcacccag gcttccacgt tcccctcgct tgggtcaccg tcgaaccaac agtacgggag 241 ggagttcggg aagcagtgtt ggaggtggca gtgggaaaac cctttcaatg gaaaatatac 301 aatctttaaa tgctgcctat gccacctctg gccctatgta tctaagtgac catgaaaatg 361 tgggttcaga aacacctaaa agcaccatga cacttggccg ttctggggga cgtctgcctt 421 acggtgttcg gatgactgct atgggtagta gccccaatat agctagcagt ggggttgcta 481 gtgacaccat agcatttgga gagcatcacc tccctcctgt gagtatggca tccactgtac 541 ctcactccct tcgtcaggcg agagataaca caatcatgga tctgcagaca cagctgaagg 601 aagtattaag agaaaatgat ctcttgcgga aggatgtgga agtaaaggag agcaaattga 661 gttcttcaat gaatagcatc aagaccttct ggagcccaga gctgaagaag gaacgagccc 721 tgagaaaaga tgaagcttcc aaaatcacca tttggaagga acagtacaga gttgtacagg 781 aggaaaacca gcacatgcag atgacaatcc aggctctcca ggatgaattg cggatccaga 841 gggacctgaa tcagctgttt cagcaggata gtagcagcag gactggcgaa ccttgtgtag 901 cagagctgac agaggagaac tttcagaggc ttcatgctga gcatgagcgg caggccaaag 961 agctgtttct tcttcgaaag acattggagg aaatggagct gcgtattgag actcaaaagc 1021 agaccctaaa tgctcgggat gaatccatta agaagcttct ggaaatgttg cagagcaaag 1081 gactttctgc caaggctacc gaggaagacc atgagagaac aagacgactg gcagaggcag 1141 agatgcacgt tcatcaccta gaaagccttt tggagcagaa ggaaaaagag aacagtatgt 1201 tgagagagga gatgcatcga aggtttgaga atgctcctga ttctgccaaa acaaaagctc 1261 tgcaaactgt tattgagatg aaggattcaa aaatttcctc tatggagcgt gggcttcgag 1321 acctggaaga ggaaattcag atgctgaaat cgaatggtgc tttgagtact gaggaaaggg 1381 aagaagaaat gaagcaaatg gaagtgtatc ggagccattc taaatttatg aaaaataaga 1441 ttggccaggt gaaacaggag ctgtccagaa aggacacaga actactcgcc ctgcagacaa 1501 agctagaaac actcacaaac cagttctcag atagtaaaca gcacattgaa gtgttgaagg 1561 agtccttgac tgctaaggag cagagggctg ccatcctgca gactgaggtg gatgctctcc 1621 gattgcgttt ggaagagaag gaaaccatgt tgaataaaaa gacaaaacaa attcaggata 1681 tggctgaaga gaaggggaca caagctggag agatacatga cctcaaggac atgttggatg 1741 tgaaggagcg gaaggttaat gttcttcaga agaagattga aaatcttcaa gagcagctta 1801 gagacaagga aaagcagatg agcagcttga aagaacgggt caaatccttg caggctgaca 1861 ccaccaacac tgacactgcc ttgacaactt tggaggaggc ccttgcagag aaagagcgga 1921 caattgaacg cttaaaggag cagagggaca gagatgagcg agagaagcaa gaggaaattg 1981 ataactacaa aaaaaaaaaa aaa //