LOCUS BC067892 2161 bp mRNA linear HTC 28-JUL-2005
DEFINITION Homo sapiens ankyrin repeat domain 16, mRNA (cDNA clone
IMAGE:5275012), with apparent retained intron.
ACCESSION BC067892
VERSION BC067892.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2161)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2161)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331116
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2161
/db_xref="H-InvDB:HIT000262859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5275012"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 486 a 640 c 634 g 401 t
ORIGIN
1 gggcggccct gaggacgcgt gcggggcagg tcacgcttgg gcctggctgc ctcaggagcc
61 accctgcacg gcgccgggcg aggctgtgcg cgccctcccg gaccctccac tttggggctt
121 tgcggtgtag cggcgcgccc cactccctta cgtgttcagt cccgaatcac gtacgggccg
181 ctgcagctcc aggacggcgg acgccagcgc tctcggatcc ccaggcccct ccgtgctcat
241 cccggaccgc tccgtccctg aggaaaaacc gccccgtgcc cggaaccgcg gcttctccca
301 cgcggggcag gccggggctg tgagggggca gcccgcctgc ggactaggcc gggggtttga
361 ggaggcggct ctgccgggga caaagccggg ggcgtgaggg gcggttctgc cgggttcggg
421 gcgcgcgggg caggttgcgt gaagaggcgg aaagtcccac tcgccctcgg cttctccctg
481 cccggccgcc ggtgtcccgc acgccgcctc cccgcgcagc ccggcccgac ccgcggcgat
541 ggcccagccc ggggacccgc ggcgcctctg caggctggtg caggagggcc ggctgcgcgc
601 cctgaaggag gagctgcagg cggccggggg ctgcccgggg ccggccgggg ataccctcct
661 gcactgcgcc gcgcgccacg ggcatcggga cgtgctggcc tatctggccg aggcctgggg
721 catggacatc gaggccacca accgagacta caagcggcct ctgcacgagg cggcctccat
781 gggccaccga gactgcgtgc gctacctgct gggccggggg gcagcggtcg actgcctgaa
841 gaaggccgac tggactcctc tgatgatggc ctgcacaagg aagaacctgg gggtgatcca
901 ggagctggtg gaacatggcg ccaatccact cctgaagaac aaagatggct ggaacagttt
961 ccacattgcc agtcgagaag gcgaccctct gatcctccag tacctgctca ctgtttgccc
1021 aggtgcctgg aagacagaga gcaaaattag aaggactcct ctgcatactg cagcaatgca
1081 tggccatttg gaggcagtca aggtgcttct taagaggtgc caatatgaac cagactacag
1141 agacaactgt ggcgtcaccg ccttgatgga cgcaatccag tgtggtcaca tcgacgtcgc
1201 taggctgctc ctcgatgaac atggggcttg cctttcagca gaagacagcc tgggtgccca
1261 ggctctgcac agggcagctg tcacagggca ggacgaagcc gtccgattct tggtctctga
1321 acttggcgtc gatgtagatg tgagagccac atcaacccac ctcacagcac ttcattatgc
1381 agctaagagt tgctgggagc ctgagcacct ttcgtttttc ggctcagaga aagccaagtg
1441 caacttgctt cagtcatcct gaacctgagt tcaaccaacc gcagccacct acgtttgacc
1501 ccagcgagat caaagttgta tatctgaggt gtaccagtgg tgaagtcagt gccacatctg
1561 cactggcccc caaggtcagc tccctgggtc tgtctccaaa aatggttgct gatgacatca
1621 ccaaccattg actggaagag tctgaggatg atagtgaaac tgaccagcca cagcagacag
1681 gcccagattg aggtggtgcc ttctgcctct gccctgatcg tcacaaccct caggaaccac
1741 cgacagaaag aaagaaacac aaaaacatga aacacagtgg tagcaccact tctgatgaga
1801 ttgtcaacat tgcctaacag atgcagcagc agtctttagc cagagaactc tctggaacca
1861 ttaaagaatt cctgggatta caggcgtgag ccaccgcacc gcgcctgggt cagttactgt
1921 atcttacgca ccttacaaac cccagaaggc tgcacacagc tcctgcacat ggtatgcctt
1981 caaggaatta cccatggatt tgaataaggt tatatatgat gtaacactca tgcgctttat
2041 ttcattttta atgagtttat attctaaaat atttgcttct ggggaaaaat aattcagaca
2101 gtacaaataa agattattcc aaataggatc ataaaaaaaa aaaagaaaaa aaaaaaaaaa
2161 a
//