LOCUS BC067861 1725 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens EPH receptor B2, mRNA (cDNA clone IMAGE:30344215),
complete cds.
ACCESSION BC067861
VERSION BC067861.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55774977
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1725
/db_xref="H-InvDB:HIT000262829"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30344215"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1725
/gene="EPHB2"
/gene_synonym="CAPB"
/gene_synonym="Hek5"
/gene_synonym="PCBC"
/gene_synonym="Tyro5"
/db_xref="GeneID:2048"
/db_xref="HGNC:HGNC:3393"
/db_xref="MIM:600997"
CDS 145..1593
/gene="EPHB2"
/gene_synonym="CAPB"
/gene_synonym="Hek5"
/gene_synonym="PCBC"
/gene_synonym="Tyro5"
/codon_start=1
/product="EPHB2 protein"
/protein_id="AAH67861.1"
/db_xref="GeneID:2048"
/db_xref="HGNC:HGNC:3393"
/db_xref="MIM:600997"
/translation="MALRRLGAALLLLPLLAAVEETLMDSTTATAELGWMVHPPSGWE
EVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPS
VPGSCKETFNLYYYEADFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKIN
TEVRSFGPVSRSGFYLAFQDYGGCMSLIAVRVFYRKCPRIIQNGAIFQETLSGAESTS
LVAARGSCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCKAGFEAVENGTVCRGCPSGT
FKANQGDEACTHCPINSRTTSEGATNCVCRNGYYRADLDPLDMPCTTIPSAPQAVISS
VNETSLMLEWTPPRDSGGREDLVYNIICKSCGSGRGACTRCGDNVQYAPRQLGLTEPR
IYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVD
SITLSWSQPDQPNGVILDYELQYYEKMKTQRS"
BASE COUNT 360 a 547 c 500 g 318 t
ORIGIN
1 attctgctgg ctgcgcggtg gcggcggctg tgtgtgcgcc gcgccttgcc gccccccctg
61 gccccccgag cccggggcgc gcgctcccgc ccgggccgtc cgggccccgc ggcgccgcgg
121 cccgaggccc cgggaagcgc agccatggct ctgcggaggc tgggggccgc gctgctgctg
181 ctgccgctgc tcgccgccgt ggaagaaacg ctaatggact ccactacagc gactgctgag
241 ctgggctgga tggtgcatcc tccatcaggg tgggaagagg tgagtggcta cgatgagaac
301 atgaacacga tccgcacgta ccaggtgtgc aacgtgtttg agtcaagcca gaacaactgg
361 ctacggacca agtttatccg gcgccgtggc gcccaccgca tccacgtgga gatgaagttt
421 tcggtgcgtg actgcagcag catccccagc gtgcctggct cctgcaagga gaccttcaac
481 ctctattact atgaggctga ctttgactcg gccaccaaga ccttccccaa ctggatggag
541 aatccatggg tgaaggtgga taccattgca gccgacgaga gcttctccca ggtggacctg
601 ggtggccgcg tcatgaaaat caacaccgag gtgcggagct tcggacctgt gtcccgcagc
661 ggcttctacc tggccttcca ggactatggc ggctgcatgt ccctcatcgc cgtgcgtgtc
721 ttctaccgca agtgcccccg catcatccag aatggcgcca tcttccagga aaccctgtcg
781 ggggctgaga gcacatcgct ggtggctgcc cggggcagct gcatcgccaa tgcggaagag
841 gtggatgtac ccatcaagct ctactgtaac ggggacggcg agtggctggt gcccatcggg
901 cgctgcatgt gcaaagcagg cttcgaggcc gttgagaatg gcaccgtctg ccgaggttgt
961 ccatctggga ctttcaaggc caaccaaggg gatgaggcct gtacccactg tcccatcaac
1021 agccggacca cttctgaagg ggccaccaac tgtgtctgcc gcaatggcta ctacagagca
1081 gacctggacc ccctggacat gccctgcaca accatcccct ccgcgcccca ggctgtgatt
1141 tccagtgtca atgagacctc cctcatgctg gagtggaccc ctccccgcga ctccggaggc
1201 cgagaggacc tcgtctacaa catcatctgc aagagctgtg gctcgggccg gggtgcctgc
1261 acccgctgcg gggacaatgt acagtacgca ccacgccagc taggcctgac cgagccacgc
1321 atttacatca gtgacctgct ggcccacacc cagtacacct tcgagatcca ggctgtgaac
1381 ggcgttactg accagagccc cttctcgcct cagttcgcct ctgtgaacat caccaccaac
1441 caggcagctc catcggcagt gtccatcatg catcaggtga gccgcaccgt ggacagcatt
1501 accctgtcgt ggtcccagcc ggaccagccc aatggcgtga tcctggacta tgagctgcag
1561 tactatgaga agatgaagac acagagaagt taaggaactt gcccaaggtc acagaggtca
1621 tatatactag agccaggatt tgaacccaag aagtctggct ccagcttgtg atcttaacct
1681 ccatgctata aagcctgtaa taacattgca aaaaaaaaaa aaaaa
//