LOCUS BC067823 1533 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens calcyclin binding protein, mRNA (cDNA clone MGC:87355
IMAGE:5260416), complete cds.
ACCESSION BC067823
VERSION BC067823.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60218912.
FEATURES Location/Qualifiers
source 1..1533
/db_xref="H-InvDB:HIT000262791"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87355 IMAGE:5260416"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1533
/gene="CACYBP"
/gene_synonym="GIG5"
/gene_synonym="PNAS-107"
/gene_synonym="RP1-102G20.6"
/gene_synonym="S100A6BP"
/gene_synonym="SIP"
/db_xref="GeneID:27101"
/db_xref="HGNC:HGNC:30423"
/db_xref="MIM:606186"
CDS 108..794
/gene="CACYBP"
/gene_synonym="GIG5"
/gene_synonym="PNAS-107"
/gene_synonym="RP1-102G20.6"
/gene_synonym="S100A6BP"
/gene_synonym="SIP"
/codon_start=1
/product="calcyclin binding protein"
/protein_id="AAH67823.1"
/db_xref="GeneID:27101"
/db_xref="HGNC:HGNC:30423"
/db_xref="MIM:606186"
/translation="MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKM
QQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTE
NVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVEN
TRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKQTINKAWVESR
EKQAKGDTEF"
BASE COUNT 517 a 257 c 333 g 426 t
ORIGIN
1 gcctcgtgcg ggtaggcgtc tgcgctcggt ttgagggctc ggcgcggggt ttcctgttcc
61 ttcttctgcg cggctgcagc tcgggacttc ggcctgaccc agcccccatg gcttcagaag
121 agctacagaa agatctagaa gaggtaaagg tgttgctgga aaaggctact aggaaaagag
181 tacgtgatgc ccttacagct gaaaaatcca agattgagac agaaatcaag aacaagatgc
241 aacagaaatc acagaagaaa gcagaacttc ttgataatga aaaaccagct gctgtggttg
301 ctcccattac aacgggctat acggtgaaaa tcagtaatta tggatgggat cagtcagata
361 agtttgtgaa aatctacatt accttaactg gagttcatca agttcccact gagaatgtgc
421 aggtgcattt cacagagagg tcatttgatc ttttggtaaa gaatctaaat gggaagagtt
481 actccatgat tgtgaacaat ctcttgaaac ccatctctgt ggaaggcagt tcaaaaaaag
541 tcaagactga tacagttctt atattgtgta gaaagaaagt ggaaaacaca aggtgggatt
601 acctgaccca ggttgaaaag gagtgcaaag aaaaagagaa gccctcctat gacactgaaa
661 cagatcctag tgagggattg atgaatgttc taaagaaaat ttatgaagat ggagacgatg
721 atatgaagca aaccattaat aaagcctggg tggaatcaag agagaagcaa gccaaaggag
781 acacggaatt ttgagacttt aaagtcgttt tgggaactgt gatgtgatgt ggaaatactg
841 atgtttccag taagggaata ttggtgagct gcatatataa atttgacaga tagctattta
901 catagccttc taagtaaagg caatgaattc tccatttcct actggaggat ttatttaaat
961 aaaatatgct tattaaacac tcctgcaaag atggttttat tagtaccctg gtcattttgt
1021 tcaaggaagg gttatattgc attctcacgt gaaatataaa aagcaagtct tgcccaataa
1081 aaacgctaca ttgtgtgtat tttttgttca gctaagaatt ggaaaagtat ttgcttgcct
1141 tttaagttac tgacatcagc ttccaccagt gtaaaaattg agtaaaacct gaagttttgc
1201 ataaaatgca aatcggtgcc tgtgcttgaa ggttgctgta gagcatctga ccccttatta
1261 ccaccttaag caatgtatat gccatgcatt accatgcact aattcaatca caggtgtttc
1321 tatctagatt taaatatatt tgtcaatgaa tgtggaatag aaaatctaaa catgacaata
1381 atagacatat ctttgtatgg taccagttag ttttgccgtg gatcagatgg tttataaaag
1441 taataaccat aaagcaaaaa ataatttgaa agcccgtcta ttcctatgct caataaagtt
1501 aagtttttct tcattagaaa aaaaaaaaaa aaa
//