LOCUS BC067797 2153 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens microtubule-associated protein 1 light chain 3 beta,
mRNA (cDNA clone MGC:87244 IMAGE:5276841), complete cds.
ACCESSION BC067797
VERSION BC067797.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2153)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2153)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: p Column: 1.
FEATURES Location/Qualifiers
source 1..2153
/db_xref="H-InvDB:HIT000262765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87244 IMAGE:5276841"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2153
/gene="MAP1LC3B"
/gene_synonym="MAP1A/1BLC3"
/db_xref="GeneID:81631"
/db_xref="HGNC:HGNC:13352"
CDS 85..462
/gene="MAP1LC3B"
/gene_synonym="MAP1A/1BLC3"
/codon_start=1
/product="microtubule-associated protein 1 light chain 3
beta"
/protein_id="AAH67797.1"
/db_xref="GeneID:81631"
/db_xref="HGNC:HGNC:13352"
/translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL
PVLDKTKFLVPDHVNMGELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESE
KDEDGFLYMVYASQETFGMKLSV"
BASE COUNT 644 a 468 c 441 g 600 t
ORIGIN
1 cttcgccgcc gcagcagccg ccgcccccgg gagccgccgg gaccctcgcg tcgtcgccgc
61 cgccgccgcc cagatccccg caccatgccg tcggagaaga ccttcaagca gcgccgcacc
121 ttcgaacaaa gagtagaaga tgtccgactt attcgagagc agcatccaac caaaatcccg
181 gtgataatag aacgatacaa gggtgagaag cagcttcctg ttctggataa aacaaagttc
241 cttgtacctg accatgtcaa catgggtgag ctcatcaaga taattagaag gcgcttacag
301 ctcaatgcta atcaggcctt cttcctgttg gtgaacggac acagcatggt cagcgtctcc
361 acaccaatct cagaggtgta tgagagtgag aaagatgaag atggattcct gtacatggtc
421 tatgcctccc aggagacgtt cgggatgaaa ttgtcagtgt aaaaccagaa aaaatgcatc
481 tcttctagaa ttgtttaaac ccttaccaag gaaaaaaaag gggtgttacc aactgagatc
541 gatcagttca tccaatcaca gatcatgaaa cagtagtgtt cccacctagg agtgttagga
601 agttgtgttt gtgtttcaag cagaaaaact gagctcaagt gagcacattc agctttggaa
661 actatattat ttaatgtagg ctagcttgtt ttcaaatttt aaaagtttaa aaataaaata
721 ctttgcattc taagttgcca ataaaataga ccttcaagtt attttaatgc tcttttctca
781 ctaataggaa cttgtaattc cagcagtaat ttaaaggctt tcagagagac cctgagtctt
841 ctcttcaggt tcacagaacc cgccgccttt ttgggtagaa gttttctact cagctagaga
901 gatctcccta agaggatctt taggcctgag ttgtgaagcg caacccccgc aaaacgcatt
961 tgccatcaca gttggcacaa acgcagggta aacgggctgt gtgagaaaac ggccctgact
1021 gtaaactgct gaaggtccct gactcctaag agaaccacac ccaaagtcct cactcttgca
1081 ggggtagaca tttctggttt ggtttgttct ctagatagtt acacacataa agacaccact
1141 caaaaggaaa cttgaataat ttataatttt gatcgagttt cttaaaagtc cctggagaaa
1201 gagtggcatt tcttctgttt caggttttgt ctgagttcaa actagtgcct gtgttgttac
1261 ggaaagcagc agtgtaccag tgtcactctg gagtacagcg ggagaaacac aaaatagtat
1321 aactgaaaac attaacattc agacacactc ccttctgcct tccggcttaa agctgtggat
1381 gatccacgtt tttgtttttt taatgttaaa tgtgtaactc agtattactg aaaaggtacc
1441 cacattttga atagtagtta tcactcttag gtcagacagc catcagaatt ctcccacacc
1501 aagtgcatgt cagttgtgga gaaaacatag caaaaagagc cgtacgctct ttacagatac
1561 taatgtcaag agttaaacct cctcaggttc aacctgtgat aaaagactag tgcttcccag
1621 tacttgcatg gggttcacta tttatagttt tcttgggagt atcacaggaa aatcacaatt
1681 acaccacttt agacgctatg tgtagcaggt cacaacttac ccttgtgtgt ttagatgtgt
1741 atgaaatacc tgtatacgtt agtgaaagct gtttactgta acggggaaaa ccagattctt
1801 tgcatctggg ccctctactg attgttaaag gagttcctgt cacctgctcc ccccaccccc
1861 gcatgcgtct gtccacttgg ctaactttta atatgtgtat ttttacatta tgtatattct
1921 taactggact gtctcgttta gactgtatac atcatatctg acattattgt aactaccgtg
1981 tgatcagtaa gattcctgta agaaatactg ctttttaaga aaaaaaataa catgctgagg
2041 ggtgacctat atcccatgtg agtggtcact ttatttatag gatctttaaa acatttttaa
2101 tgaactaagt tgaataaagg cacaattaaa aactgccaaa aaaaaaaaaa aaa
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