LOCUS BC067733 1334 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens transient receptor potential cation channel, subfamily
M, member 3, mRNA (cDNA clone IMAGE:5277420), partial cds.
ACCESSION BC067733
VERSION BC067733.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1334)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1334)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55953088.
FEATURES Location/Qualifiers
source 1..1334
/db_xref="H-InvDB:HIT000262701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5277420"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1334
/gene="TRPM3"
/gene_synonym="GON-2"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/db_xref="GeneID:80036"
/db_xref="HGNC:HGNC:17992"
/db_xref="MIM:608961"
CDS <1..1085
/gene="TRPM3"
/gene_synonym="GON-2"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/codon_start=3
/product="TRPM3 protein"
/protein_id="AAH67733.1"
/db_xref="GeneID:80036"
/db_xref="HGNC:HGNC:17992"
/db_xref="MIM:608961"
/translation="LLLPAPRISAQAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRL
IGQHVGLTPSISVLQNEKNESRLYRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHS
NKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLI
KAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGR
DVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINT
RCLPFFSLDSRLFYSFWGSCQLDSVGIGQGVPVVALIVEGGPNVISIVLEYLRDTPPV
PVVVCDGSGRASDILAFGHKYSEEGG"
BASE COUNT 388 a 300 c 326 g 320 t
ORIGIN
1 ggctgctttt gccagcaccc agaatcagtg ctcaggctca gaaatcctgg atagaaagag
61 cattttataa aagagaatgt gtccacatca tacccagcac caaagacccc cataggtgtt
121 gctgtgggcg tctgataggc cagcatgttg gcctcacccc cagtatctcc gtgcttcaga
181 atgagaaaaa tgaaagtcgc ctctaccgaa atgacatcca gtctgaaaag tggtccatca
241 gcaaacacac tcaactcagc cctacggatg cttttgggac cattgagttc caaggaggtg
301 gccattccaa caaagccatg tatgtgcgag tatcttttga tacaaaacct gatctcctct
361 tacacctgat gaccaaggaa tggcagttgg agcttcccaa gcttctcatc tctgtccatg
421 ggggcctgca gaactttgaa ctccagccaa aactcaagca agtctttggg aaagggctca
481 tcaaagcagc tatgacaact ggagcgtgga tattcactgg aggggttaac acaggtgtta
541 ttcgtcatgt tggcgatgcc ttgaaggatc atgcctctaa gtctcgagga aagatatgca
601 ccataggtat tgccccctgg ggaattgtgg aaaaccagga ggacctcatt ggaagagatg
661 ttgtccggcc ataccagacc atgtccaatc ccatgagcaa gctcactgtt ctcaacagca
721 tgcattccca cttcattctg gctgacaacg ggaccactgg aaaatatgga gcagaggtga
781 aacttcgaag acaactggaa aagcatattt cactccagaa gataaacaca agatgcctgc
841 cgtttttctc tcttgactcc cgcttgtttt attcattttg gggtagttgc cagttagact
901 cagttggaat cggtcaaggt gttcctgtgg tggcactcat agtggaagga ggacccaatg
961 tgatctcgat tgttttggag taccttcgag acacccctcc cgtgccagtg gttgtctgtg
1021 atgggagtgg acgggcatcg gacatcctgg cctttgggca taaatactca gaagaaggcg
1081 ggtaggtaac tttccaggcc ccatggaaga accctaaagc ctgtttggaa acgagggtat
1141 gagtggatta tgttttcagt agctcaacca agacctcaaa tcaaaacaag ctatgaacaa
1201 attgtctaaa aaatgtctgt catgggaggg ctgtggtgaa gaacagagaa acatattcta
1261 aatgtcctgt gaagtgggaa attctatgaa agctacacgg ataataaaaa gggtgaggaa
1321 aaaaaaaaaa aaaa
//