LOCUS BC067525 1994 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Williams-Beuren syndrome chromosome region 17, mRNA
(cDNA clone MGC:79428 IMAGE:7002172), complete cds.
ACCESSION BC067525
VERSION BC067525.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1994)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1994)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Narayan Bhat
cDNA Library Preparation: Bhat Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 172 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538494.
FEATURES Location/Qualifiers
source 1..1994
/db_xref="H-InvDB:HIT000262683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:79428 IMAGE:7002172"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_195"
/lab_host="DH10B"
/note="Vector: pDNR-Dual"
gene 1..1994
/gene="WBSCR17"
/gene_synonym="DKFZp761D2324"
/gene_synonym="GALNT16"
/gene_synonym="GALNT20"
/gene_synonym="GALNTL3"
/db_xref="GeneID:64409"
/db_xref="HGNC:HGNC:16347"
CDS 1..1797
/gene="WBSCR17"
/gene_synonym="DKFZp761D2324"
/gene_synonym="GALNT16"
/gene_synonym="GALNT20"
/gene_synonym="GALNTL3"
/codon_start=1
/product="Williams-Beuren syndrome chromosome region 17"
/protein_id="AAH67525.1"
/db_xref="GeneID:64409"
/db_xref="HGNC:HGNC:16347"
/translation="MASLRRVKVLLVLNLIAVAGFVLFLAKCRPIAVRSGDAFHEIRP
RAEVANLSAHSASPIQDAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPAT
LSPAEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYSKDLPQISIIFIF
VNEALSVILRSVHSAVNHTPTHLLKEIILVDDNSDEEELKVPLEEYVHKRYPGLVKVV
RNQKREGLIRARIEGWKVATGQVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSID
NIKQDNFEVQRYENSAHGYSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNR
KFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNSNIGF
YTKRNALRVAEVWMDDYKSHVYIAWNLPLENPGIDIGDVSERRALRKSLKCKNFQWYL
DHVYPEMRRYNNTVAYGELRNNKAKDVCLDQGPLENHTAILYPCHGWGPQLARYTKEG
FLHLGALGTTTLLPDTRCLVDNSKSRLPQLLDCDKVKSSLYKRWNFIQNGAIMNKGTG
RCLEVENRGLAGIDLILRSCTGQRWTIKNSIK"
BASE COUNT 472 a 552 c 581 g 389 t
ORIGIN
1 atggcttcac tgagaagagt caaagtgctg ttggtgttga acttgatcgc ggtagccggc
61 ttcgtgctct tcctggccaa gtgccggccc atcgcggtgc gcagcggaga cgccttccac
121 gagatccggc cgcgcgccga ggtggccaac ctcagcgcgc acagcgccag ccccatccag
181 gatgcggtcc tgaagcgcct gtcgctgctg gaggacatcg tgtaccggca gctgaatggc
241 ttatccaaat cccttgggct cattgaaggt tatggtgggc ggggtaaagg gggccttccg
301 gctactcttt ccccggctga agaagaaaag gctaagggac cccatgagaa gtatggctac
361 aattcatacc tcagtgaaaa aatttcactg gaccgttcca ttccggatta tcgtcccacc
421 aagtgtaagg agctcaagta ctccaaggac ctgccccaga tatccatcat attcatcttc
481 gtgaacgagg ccctgtcggt gatcctgcgg tccgtgcaca gtgccgtcaa tcacacgccc
541 acacacctgc tgaaggaaat cattctggtg gatgacaaca gcgacgaaga ggagctgaag
601 gtccccctag aggagtatgt ccacaaacgc taccccgggc tggtgaaggt ggtaagaaat
661 cagaagaggg aaggcctgat ccgcgctcgc attgagggct ggaaggtggc taccgggcag
721 gtcactggct tctttgatgc ccacgtggaa ttcaccgctg gctgggctga gccggttcta
781 tcccgcatcc aggaaaaccg gaagcgtgtg atcctcccct ccattgacaa catcaaacag
841 gacaactttg aggtgcagcg gtacgagaac tcggcccacg ggtacagctg ggagctgtgg
901 tgcatgtaca tcagcccccc aaaagactgg tgggacgccg gagacccttc tctccccatc
961 aggaccccag ccatgatagg ctgctcgttc gtggtcaaca ggaagttctt cggtgaaatt
1021 ggtcttctgg atcctggcat ggatgtatac ggaggagaaa atattgaact gggaatcaag
1081 gtatggctct gtgggggcag catggaggtc cttccttgct cacgggtggc ccacattgag
1141 cggaagaaga agccatataa tagcaacatt ggcttctaca ccaagaggaa tgctcttcgc
1201 gttgctgagg tctggatgga cgattacaag tctcatgtgt acatagcgtg gaacctgccg
1261 ctggagaatc cgggaattga catcggtgat gtctccgaaa gaagagcatt aaggaaaagt
1321 ttaaagtgta agaatttcca gtggtacctg gaccatgttt acccagaaat gagaagatac
1381 aataataccg ttgcttacgg ggagcttcgc aacaacaagg caaaagatgt ctgcttggac
1441 caggggccgc tggagaacca cacagcaata ttgtatccgt gccatggctg gggaccacag
1501 cttgcccgct acaccaagga aggcttcctg cacttgggtg ccctggggac caccacactc
1561 ctccctgaca cccgctgcct ggtggacaac tccaagagtc ggctgcccca gctcctggac
1621 tgcgacaagg tcaagagcag cctgtacaag cgctggaact tcatccagaa tggagccatc
1681 atgaacaagg gcacgggacg ctgcctggag gtggagaacc ggggcctggc tggcatcgac
1741 ctcatcctcc gcagctgcac aggtcagagg tggaccatta agaactccat caagtagagg
1801 gagggagctg gggcactgga gcctggcccc caggacatgg ctcctccccc caacatctgg
1861 accagctgcc ctggcggaga gacagcaagg ggccggcagg tgctcgatgg gccccccagg
1921 gcttctccag ggcagcacag ggaccccgga tgaagactct gtcccccctc aggcattcag
1981 ctgcccacaa gttt
//