LOCUS BC067282 2908 bp mRNA linear HTC 16-JUN-2008
DEFINITION Homo sapiens zinc finger protein 204 pseudogene, mRNA (cDNA clone
IMAGE:6184975).
ACCESSION BC067282
VERSION BC067282.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2908)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: clone inconsistent with known
gene structure.
FEATURES Location/Qualifiers
source 1..2908
/db_xref="H-InvDB:HIT000262527"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6184975"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1057 a 510 c 576 g 765 t
ORIGIN
1 cggggtttca ccaccttgcc caggctggac tcgggtgatc tgcccgcctc ggcctcccaa
61 agtgctggga ttacaggtgt gagccaccat gcctggcata caaatctttt ttgcccaaaa
121 ttttaagata aaaagcaagg ataatgtctc aaatttattt tatagtgcca agaaaattag
181 attataatgt gtaacacaca gtgagtgctc aacaaatatg tgatgtaact tgatactctt
241 tctttcattt cccccaattt ggttaccttc atctattact ttggatgcaa atcagtataa
301 ttgcttctgg tgttaatgca aatatatttg gtttttagtt accaaagacg ttggaagagg
361 tggctatgga catcacctgg gagaagtgga agcaaatgga cactgttcag aagtccatat
421 acagaaacat gttggaaaaa tatagaaacc tggttttgct agatgggaag cttgaacgtg
481 gggccaagac atcaagagta gagcagcagg acatttcaaa agaagattaa tctcaaagat
541 tagagatgga agaacttgca aagagaaagt ctgtaccgga agaaatctgg aaatctagag
601 gccagtttaa gaatcagcag ctaaacaagg agaataatct agggcaagag atagctacct
661 gcacaaaaat tcctaccaga aaaagagaca tagaatctaa tgaatttgtg aaaaatttta
721 ctgtaagatc aatacttgtt gcagaacaga tagatcctat ggaagagaat tgtcataaat
781 atggtacatg ttgaaagatg ctcaaacaaa actcagattt aattatacaa agaaagtatg
841 atggaaaaaa aaaaaccttg taaatatagt gaatgtggga gaaccttcag aggccacatc
901 actcttgttc agcatcaaat aactcattgt ggagagagac cctgtaaatg tactgagtgt
961 agaaagggat ttaatcagag ttcccactta agaaataatc agaaaactct ttcaggagaa
1021 aagccctaca aatgcagtga gtgtgggaag gccttcagtt attgcttagt tcttaatcaa
1081 caccagagaa ttcacagtgg agagaaacct tatcagggta ctgaatgtgg caagacattc
1141 agtcgtagta cataccttac tcagcatcaa agaattcaca ctggtgagaa gccctataca
1201 tgtcttgaat gtggaaaggc ttttagtcag aacacacatc ttactctaca tcagagaatc
1261 catactggag agaaacctta tgaatgcaat gaatgtggta ggtcctttag tcagagtgca
1321 catcttactc aacatcaaag aatgtataca ggagaaaaac tctatgaatg taatgaatgt
1381 gagaaagcct tccatgatca ctcagctctt attcaacatc atattgtcca tactgcagag
1441 aaaccctatg aatatcatga ctgggaaaac tttcagttac tgttcagacc tcattcaaca
1501 tcagagaatg cacactggag agaaaccata caaatgcaat gaatgtggga atgcctttag
1561 tgattgttca tcccttattc agcatcaaag aactcacact ggagaagagc cttatgaatg
1621 taagcaatgt ggaaaagcct ttagcagaag cacatacctt actcaacatc agagaagtca
1681 cgcaggagag aaacagtata aatgcaatga atgtgagaaa actttcagcc tgagttcatt
1741 ccttacacag catatgaggg ttcagactgg agaaaaaccc tacaaatata atgaatatgg
1801 aaaagctttt agtgactgct caggacattt tcagagaact cacactggag agaagccctg
1861 tgaatgtaat gactgtggga aacctttcag tttctgttca gccctaattc aacataagag
1921 aattcatacc agaaagaagc cctgactgta ccttcatacc agtaaatgca ctgactgtgg
1981 aaaagccttc agtgattggt tagcacttgt tcaacatcag ataactcaac actggagaaa
2041 aaccgtataa atgtactgaa tgtggaaaag ccttcagttg gagtacagac ctcaaaaatc
2101 accagaaaac tcatactagt gaaaaatcct ataaatgtaa tgaatgtaga aaggccttta
2161 gttactgctc tggtcttatt caatgtcagg tcattcatac tatagaaaaa ccttatgaat
2221 acggtaaatg tggcaaagcc tttaggcaga ggacagacct taaaaaacat cagaaaatgc
2281 ataccgaaga gaaaccctat gaatgtaatg aatgtgggaa agcctttagc cagagcacat
2341 atcttacaaa acaccaaaaa attcatagtg aagagaaatc aaatatacat actgagtgtg
2401 gggaaaccat tagacaaaac tcttcttttt tacaacaata aaaacctcac actggagaga
2461 ttctctgaat gccttaagaa tttggttaat atggagaccc ttcccaggga aacagaagga
2521 ggatcgtgaa aactgttgac tacttagaat gatcacatgg tttagtggag agagcatgat
2581 tctgggtttt aaaagtcatg gatctcaatc tcagctccta ttactaacta gatcttttac
2641 tttggggtaa gtcacttcat atctttaggc cttaatttcc tcatctgaaa aactggaagg
2701 cctgacttgt tgagctttaa gatcctcaat tattatattt actaggaatt caagtttcta
2761 tagatgtggt tcagaattgt gacttattta ttgtacatca ggtgtgattc acaagtgagc
2821 ttgtagtagt tattaaggag tcaataaaga tatgatatag aaaaaaaaaa aaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//