LOCUS BC067278 1970 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin binding protein 6 (amisyn), mRNA (cDNA clone
MGC:75355 IMAGE:6178786), complete cds.
ACCESSION BC067278
VERSION BC067278.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1970)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1970)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46048194.
FEATURES Location/Qualifiers
source 1..1970
/db_xref="H-InvDB:HIT000262523"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75355 IMAGE:6178786"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1970
/gene="STXBP6"
/gene_synonym="amisyn"
/gene_synonym="HSPC156"
/db_xref="GeneID:29091"
/db_xref="HGNC:HGNC:19666"
/db_xref="MIM:607958"
CDS 716..1348
/gene="STXBP6"
/gene_synonym="amisyn"
/gene_synonym="HSPC156"
/codon_start=1
/product="syntaxin binding protein 6 (amisyn)"
/protein_id="AAH67278.1"
/db_xref="GeneID:29091"
/db_xref="HGNC:HGNC:19666"
/db_xref="MIM:607958"
/translation="MSAKSAISKEIFAPLDERMLGAVQVKRRTKKKIPFLATGGQGEY
LTYICLSVTNKKPTQASITKVKQFEGSTSFVRRSQWMLEQLRQVNGIDPNGDSAEFDL
LFENAFDQWVASTASEKCTFFQILHHTCQRYLTDRKPEFINCQSKIMGGNSILHSAAD
SVTSAVQKASQALNERGERLGRAEEKTEDLKNSAQQFAETAHKLAMKHKC"
BASE COUNT 492 a 458 c 521 g 499 t
ORIGIN
1 ccaggctgca cggtaggacc ggggcgaggg gagccaggcg gtcagggcgg aggccaagcc
61 cgggagatgc ggttgcagcc gccacggctg ttggggcgcc tggcgctccg tccgaggcgg
121 gtggctgtga ggccagggga gtaggcaggc tcccagagag attcttccaa gttggcgggt
181 ggcgggagag ggggccgcgc gccccggcgc agctgctttg tgcgcgcaga gagggactcg
241 tgtccctggt tctctccaac cctgggaccc gttgtgcggg cagtattggg caagccgcag
301 aacggagcga tttcctccga gaaagttgag gatggagcct ttttttccgc accgtccccg
361 cgatggcatg ggccccgaga atgctgcccc gaggctccca gtgtggggga gctcggggtc
421 gctgcgcctc tagcttgagc gcagaaatcc gcgaatcact ccgatcttcg cgaactctgg
481 catcttctag gaaaatcatt actgccaaaa ctgaggcgag cttttctggc gggcacggca
541 ccctgccccc agggcgctgg ccctgggcga tgcccccttt ccgatctcag gcttggtcaa
601 gggcgccagg ttccgaattc gcgcttgccg tgcacgccgg catcgagcct caccaacacc
661 gccgggcaac gtggctggag tagattcact gcgtgctgtc ctcacttgtt ctacaatgag
721 tgccaaatct gctatcagca aggaaatttt tgcacctctt gatgaaagga tgctgggagc
781 tgtccaagtc aagaggagga caaagaaaaa gattcctttc ttggcaactg gaggtcaagg
841 cgaatattta acttatatct gcctgtcagt gacaaacaag aaacccacac aggcgtccat
901 cacaaaggtc aaacagtttg aaggctccac atcatttgtt cggagatcac agtggatgct
961 cgagcagctt cgccaggtta atggtatcga tcctaatggg gattcggcag agtttgattt
1021 gttgtttgaa aatgcttttg accagtgggt agccagcaca gcgtcagaaa aatgcacctt
1081 cttccagatc ctccaccata cctgccagag gtacctcacg gacaggaagc cagagtttat
1141 taactgccaa tccaaaatta tgggaggaaa cagcatcctc cattcagctg ctgacagcgt
1201 gaccagcgca gtgcagaagg caagccaggc cttgaatgag cgtggagagc gattaggccg
1261 agcagaggag aagacagaag acctgaagaa cagcgcccag cagtttgcag aaactgcgca
1321 caagcttgcc atgaagcaca aatgttgaga aactgcctat cctggtgact cttcttaaga
1381 gaaactgaag agtttgttca gcagttttta caagaattcg ggacctccgc ttgcttcttt
1441 ttttccaata tttggacact tagagtggtt tttgtttttt cttttcagat gttaatgtga
1501 aagaaagggt gttgcatttt tacatttccc taatgatctt gctaataaat gctacaatag
1561 catcggcttc attttgggtt tttgcctcct cccactgtgt gtatgtgtgt atatgtatgt
1621 tttgaatatg ttttctttat taaaaaatat tttttgtagt ttgaatatga aatttggacc
1681 aaatgataaa ctgcgctgag tctaaactgg caacatgtat ttttttctct gatattaagc
1741 aggaaggcat tttaatgtgg tgacatcaga tgttattttt cctagatgaa aataaaagtc
1801 aagcagtgat tagtttcact cactgtccta gctacactta atttgaagat taaaattcta
1861 cattgtggaa aacaattgaa tttattggga aaaacagcag tcttagattt tgctccttgc
1921 atagtaatct tttgcatgaa ccatcaccag cgttcaaaaa aaaaaaaaaa
//