LOCUS BC067266 4874 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens periaxin, mRNA (cDNA clone MGC:74886 IMAGE:6177899),
complete cds.
ACCESSION BC067266
VERSION BC067266.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32490588.
FEATURES Location/Qualifiers
source 1..4874
/db_xref="H-InvDB:HIT000262511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74886 IMAGE:6177899"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4874
/gene="PRX"
/gene_synonym="CMT4F"
/gene_synonym="KIAA1620"
/db_xref="GeneID:57716"
/db_xref="HGNC:HGNC:13797"
/db_xref="MIM:605725"
CDS 272..4657
/gene="PRX"
/gene_synonym="CMT4F"
/gene_synonym="KIAA1620"
/codon_start=1
/product="periaxin"
/protein_id="AAH67266.1"
/db_xref="GeneID:57716"
/db_xref="HGNC:HGNC:13797"
/db_xref="MIM:605725"
/translation="MEARSRSAEELRRAELVEIIVETEAQTGVSGINVAGGGKEGIFV
RELREDSPAARSLSLQEGDQLLSARVFFENFKYEDALRLLQCAEPYKVSFCLKRTVPT
GDLALRPGTVSGYEIKGPRAKVAKLNIQSLSPVKKKKMVPGALGVPADLAPVDVEFSF
PKFSRLRRGLKAEAVKGPVPAAPARRRLQLPRLRVREVAEEAQAARLAAAAPPPRKAK
VEAEVAAGARFTAPQVELVGPRLPGAEVGVPQVSAPKAAPSAEAAGGFALHLPTLGLG
APAPPAVEAPAVGIQVPQVELPALPSLPTLPTLPCLETREGAVSVVVPTLDVAAPTVG
VDLALPGAEVEARGEAPEVALKMPRLSFPRFGARAKEVAEAKVAKVSPEARVKGPRLR
MPTFGLSLLEPRPAAPEVVESKLKLPTIKMPSLGIGVSGPEVKVPKGPEVKLPKAPEV
KLPKVPEAALPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVELPKVSEMKLPKVP
EMAVPEVRLPEVQLLKVSEMKLPKVPEMAVPEVRLPEVQLPKVSEMKLPEVSEVAVPE
VRLPEVQLPKVPEMKVPEMKLPKVPEMKLPEMKLPEVQLPKVPEMAVPDVHLPEVQLP
KVPEMKLPEMKLPEVKLPKVPEMAVPDVHLPEVQLPKVPEMKLPKMPEMAVPEVRLPE
VQLPKVSEMKLPKVPEMAVPDVHLPEVQLPKVCEMKVPDMKLPEIKLPKVPEMAVPDV
HLPEVQLPKVSEIRLPEMQVPKVPDVHLPKAPEVKLPRAPEVQLKATKAEQAEGMEFG
FKMPKMTMPKLGRAESPSRGKPGEAGAEVSGKLVTLPCLQPEVDGEAHVGVPSLTLPS
VELDLPGALGLQGQVPAAKMGKGERVEGPEVAAGVREVGFRVPSVEIVTPQLPAVEIE
EGRLEMIETKVKPSSKFSLPKFGLSGPKVAKAEAEGAGRATKLKVSKFAISLPKARVG
AEAEAKGAGEAGLLPALDLSIPQLSLDAHLPSGKVEVAGADLKFKGPRFALPKFGVRG
RDTEAAELVPGVAELEGKGWGWDGRVKMPKLKMPSFGLARGKEAEVQGDRASPGEKAE
STAVQLKIPEVELVTLGAQEEGRAEGAVAVSGMQLSGLKVSTARQVVTEGHDAGLRMP
PLGISLPQVELTGFGEAGTPGQQAQSTVPSAEGTAGYRVQVPQVTLSLPGAQVAGGEL
LVGEGVFKMPTVTVPQLELDVGLSREAQAGEAATGEGGLRLKLPTLGARARVGGEGAE
EQPPGAERTFCLSLPDVELSPSGGNHAEYQVAEGEGEAGHKLKVRLPRFGLVRAKEGA
EEGEKAKSPKLRLPRVGFSQSEMVTGEGSPSPEEEEEEEEEGSGEGASGRRGRVRVRL
PRVGLAAPSKASRGQEGDAAPKSPVREKSPKFRFPRVSLSPKARSGSGDQEEGGLRVR
LPSVGFSETGAPGPARMEGAQAAAV"
BASE COUNT 993 a 1371 c 1704 g 806 t
ORIGIN
1 gagctctcga ggtgtctgga ggctcagcga gcgccggacc caggaggccc aaggagctgg
61 aggtgaccct caggcagcaa gaaccccacg gaagggcgtg agccctgcag acagctgtgc
121 ggcacctcgg gctgggctcc tgttaggagg aagtgcctgc acccaggcag cggctcagag
181 gcagctgctc catgcagaac tgaagctggt tctgcagcag aaaggggaga ggacacagga
241 gcctggggtg caggtgcctc ccagcaacgc catggaggcc aggagccgga gtgccgagga
301 gctgaggcgg gcggagttgg tggaaattat cgtggagacg gaggcgcaga ccggggtcag
361 cggcatcaac gtagcgggcg gcggcaaaga gggaatcttc gttcgggagc tgcgcgagga
421 ctcacccgcc gccaggagcc tcagcctgca ggaaggggac cagctgctga gtgcccgagt
481 gttcttcgag aacttcaagt acgaggacgc actacgcctg ctgcaatgcg ccgagcctta
541 caaagtctcc ttctgcctga agcgcactgt gcccaccggg gacctggctc tgcggcccgg
601 gaccgtgtct ggctacgaga tcaagggccc gcgggccaag gtggccaagc tgaacatcca
661 gagtctgtcc cctgtgaaga agaagaagat ggtgcctggg gctctggggg tccccgctga
721 cctggcccct gttgacgtcg agttctcctt tcccaagttc tcccgcctgc gtcggggcct
781 caaagccgag gctgtcaagg gtcctgtccc ggctgcccct gcccgccggc gcctccagct
841 gcctcggctg cgtgtacgag aagtggccga agaggctcag gcagcccggc tggccgccgc
901 cgctcctccc cccaggaaag ccaaggtgga ggctgaggtg gctgcaggag ctcgtttcac
961 agcccctcag gtggagctgg ttgggccgcg gctgccaggg gcggaggtgg gtgtccccca
1021 ggtctcagcc cccaaggctg ccccctcagc agaggcagct ggtggctttg ccctccacct
1081 gccaaccctt gggctcggag ccccggctcc gcctgctgtg gaggccccag ccgtgggaat
1141 ccaggtcccc caggtggagc tgcctgcctt gccctcactg cccactctgc ccacacttcc
1201 ctgcctagag acccgggaag gggctgtgtc ggtagtggtg cccaccctgg atgtggcagc
1261 accgactgtg ggggtggacc tggccttgcc gggtgcagag gtggaggccc ggggagaggc
1321 acctgaggtg gccctgaaga tgccccgcct tagttttccc cgatttgggg ctcgagcaaa
1381 ggaagttgct gaggccaagg tagccaaggt cagccctgag gccagggtga aaggtcccag
1441 acttcgaatg cccacctttg ggctttccct cttggagccc cggcccgctg ctcctgaagt
1501 tgtagagagc aagctgaagc tgcccaccat caagatgccc tcccttggca tcggagtgtc
1561 agggcccgag gtcaaggtgc ccaagggacc tgaagtgaag ctccccaagg ctcctgaggt
1621 caagcttcca aaagtgcccg aggcagccct tccagaggtt cgactcccag aggtggagct
1681 ccccaaggtg tcagagatga aactcccaaa ggtgccagag atggctgtgc cggaggtgcg
1741 gcttccagag gtagagctgc ccaaagtgtc agagatgaaa ctcccaaagg tgccagagat
1801 ggctgtgccg gaggtgcggc ttccagaggt acagctgctg aaagtgtcgg agatgaaact
1861 cccaaaggtg ccagagatgg ctgtgccgga ggtgcggctt ccagaggtac agctgccgaa
1921 agtgtcagag atgaaactcc cagaggtgtc agaggtggct gtgccagagg tgcggcttcc
1981 agaggtgcag ctgccgaaag tgccagagat gaaagtccct gagatgaagc ttccaaaggt
2041 gcctgagatg aaacttcctg agatgaaact ccctgaagtg caactcccga aggtgcccga
2101 gatggccgtg cccgatgtgc acctcccaga agtgcagctt ccaaaagtcc cagagatgaa
2161 gctccctgag atgaaactcc ctgaggtgaa actcccgaag gtgcccgaga tggctgtgcc
2221 cgatgtgcac ctcccggaag tgcagctccc gaaagtccca gagatgaaac tccctaaaat
2281 gcctgagatg gctgtgccag aggttcgact ccccgaggtg cagctgccaa aagtctcaga
2341 gatgaaactc cccaaggtgc ctgaaatggc cgtgcccgat gtgcacctcc cagaggtgca
2401 gctgcccaaa gtctgtgaaa tgaaagtccc tgacatgaag ctcccagaga taaaactccc
2461 caaggtgcct gagatggctg tgcccgatgt gcacctcccc gaggtgcagc tgccgaaagt
2521 gtcagagatt cggctgccgg aaatgcaagt gccgaaggtt cccgacgtgc atcttccgaa
2581 ggcaccagag gtgaagctgc ccagggctcc ggaggtgcag ctaaaggcca ccaaggcaga
2641 acaggcagaa gggatggaat ttggcttcaa gatgcccaag atgaccatgc ccaagctagg
2701 gagggcagag tccccatcac gtggcaagcc aggcgaggcg ggtgctgagg tctcagggaa
2761 gctggtaaca cttccctgtc tgcagccaga ggtggatggt gaggctcatg tgggtgtccc
2821 ctctctcact ctgccttcag tggagctaga cctgccagga gcacttggcc tgcaggggca
2881 ggtcccagcc gctaaaatgg gcaagggaga gcgggtggag ggccctgagg tggcagcagg
2941 ggtcagggaa gtgggcttcc gagtgccctc tgttgaaatt gtcaccccac agctgcccgc
3001 cgtggaaatt gaggaagggc ggctggagat gatagagaca aaagtcaagc cctcttccaa
3061 gttctcctta cctaagtttg gactctcggg gccaaaggtg gctaaggcag aggctgaggg
3121 ggctgggcga gctaccaagc tgaaggtatc caaatttgcc atctcactcc ccaaggctcg
3181 ggtgggggct gaggctgagg ccaaaggggc tggggaggca ggcctgctgc ctgccctcga
3241 tctgtccatc ccacagctca gcctggatgc ccacctgccc tcaggcaagg tagaggtggc
3301 aggggccgac ctcaagttca aggggcccag gtttgctctc cccaagtttg gggtcagagg
3361 ccgggacact gaggcagcag aactagtgcc aggggtggct gagttggagg gcaagggctg
3421 gggctgggat gggagggtga agatgcccaa gctgaagatg ccttcctttg ggctggctcg
3481 agggaaggaa gcagaagttc aaggtgatcg tgccagcccg ggggaaaagg ctgagtccac
3541 cgctgtgcag cttaagatcc ccgaggtgga gctggtcacg ctgggcgccc aggaggaagg
3601 gagggcagag ggggctgtgg ccgtcagtgg aatgcagctg tcaggcctga aggtgtccac
3661 agccaggcag gtggtcactg agggccatga cgcggggctg aggatgcctc cgctgggcat
3721 ctccctgcca caggtggagc tgaccggctt tggggaggca ggtaccccag ggcagcaggc
3781 tcagagtaca gtcccttcag cagagggcac agcaggctac agggttcagg tgccccaggt
3841 gaccctgtct ctgcctggag cccaggttgc aggtggtgag ctgctggtgg gtgagggtgt
3901 ctttaagatg cccaccgtga cagtgcccca gcttgagctg gacgtggggc taagccgaga
3961 ggcacaggcg ggcgaggcgg ccacaggcga gggtgggctg aggctgaagt tgcccacact
4021 gggggccaga gctagggtgg ggggcgaggg tgctgaggag cagcccccag gggccgagcg
4081 taccttctgc ctctcactgc ccgacgtgga gctctcgcca tccgggggca accatgccga
4141 gtaccaggtg gcagaggggg agggagaggc cggacacaag ctcaaggtac ggctgccccg
4201 gtttggcctg gtgcgggcca aggagggggc cgaggagggt gagaaggcca agagccccaa
4261 actcaggctg ccccgagtgg gcttcagcca aagtgagatg gtcactgggg aagggtcccc
4321 cagccccgag gaggaggagg aggaggagga agagggcagt ggggaagggg cctcgggtcg
4381 ccggggccgg gtccgggtcc gcttgccacg tgtaggcctg gcggcccctt ctaaagcctc
4441 tcgggggcag gagggcgatg cagcccccaa gtcccccgtc agagagaagt cacccaagtt
4501 ccgcttcccc agggtgtccc taagccccaa ggcccggagt gggagtgggg accaggaaga
4561 gggtggattg cgggtgcggc tgcccagcgt ggggttttca gagacagggg ctccaggccc
4621 ggccaggatg gagggggctc aggctgcggc tgtctgaagc ccctagtcag atggggatcc
4681 cttcttgcct tcctttctct accccctcgc tgttgtgtgt gtgataacta gcactaaccc
4741 taagagggcc gggaggtggg tgactgacca gggctggcag ggaggcctgc tcctgtctct
4801 ctggcaggag tgcctgtacc ccaccaagcc atgtgaataa aataatctgg aagtaaaaaa
4861 aaaaaaaaaa aaaa
//